G1177994


Basic Information

Item Value
gene id G1177994
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 44214374 ~ 44215085 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1343426
CTCGTGTGTGCCGACAGGGGAGAAGTCAGTGGACACCCCACTGTCACTCTGGTCATCGTCACTGCATTCCATCTCAATCCTGACCATAGGTTGGACACTGAGCTGGGCAGAAGGACGAGACTGGACCTCCTCCGCTTTCTCTCCTGCCACTGTTTCAATATGTTCTTTCTCTGGAATCTCTGTGTCTTCCTCACTTACCGCTGCCCTCTCTTCCACCTCGAcagtctgtactctctctccctgctctctctcttccacctcgacagtctgtactctctctccctgctccctctcttccacctcgacagtctgtactctctctcccttctctctctcttccacctcgacagtctgtactctctctccctgctctctctcttccacctcgacagtctgtactctctctccctgctctctc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106607081

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1343426 True 418 lncRNA 0.54 2 44214374 44215085

Neighbor

gene id symbol gene type direction distance location
LOC110486489 LOC106607084 coding downstream 45224 44121355 ~ 44169150 (-)
LOC110486490 NA coding downstream 96131 44116040 ~ 44118663 (-)
tlcd4b LOC106601359 coding downstream 126722 44072439 ~ 44087652 (-)
LOC110486482 cnn1 coding downstream 146673 44053297 ~ 44067701 (-)
LOC110486485 LOC106596625 coding downstream 166577 44044900 ~ 44047797 (-)
LOC110485183 LOC106607072 coding upstream 7448 44222533 ~ 44224572 (-)
LOC110486496 LOC106607078 coding upstream 80491 44295576 ~ 44311575 (-)
LOC110486497 LOC106601353 coding upstream 104916 44320001 ~ 44342927 (-)
LOC110486499 syfa coding upstream 145329 44360414 ~ 44370469 (-)
LOC110486500 LOC106601349 coding upstream 162356 44377441 ~ 44397427 (-)
G1177981 NA non-coding downstream 3461 44210587 ~ 44210913 (-)
G1177988 NA non-coding downstream 7698 44206459 ~ 44206676 (-)
G1177987 NA non-coding downstream 7931 44206082 ~ 44206443 (-)
G1177962 NA non-coding downstream 41249 44172556 ~ 44173125 (-)
G1178001 NA non-coding upstream 10975 44226060 ~ 44226533 (-)
G1178005 NA non-coding upstream 17696 44232781 ~ 44233031 (-)
G1178006 NA non-coding upstream 18545 44233630 ~ 44272916 (-)
G1178030 NA non-coding upstream 57976 44273061 ~ 44273273 (-)
G1178035 NA non-coding upstream 63285 44278370 ~ 44278812 (-)
epor LOC106601362 other downstream 185389 44024053 ~ 44029014 (-)
zgc:158403 LOC106601368 other downstream 230807 43977147 ~ 43992248 (-)
G1177709 LOC106601291 other downstream 240317 43973539 ~ 43974057 (-)
G1177552 NA other downstream 598366 43601363 ~ 43647736 (-)
G1177238 LOC106607096 other downstream 799271 43414159 ~ 43415103 (-)
G1178281 NA other upstream 247869 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 268537 44467268 ~ 44545484 (-)
G1178286 LOC106607023 other upstream 298351 44513436 ~ 44530531 (-)
G1178763 LOC106607027 other upstream 437987 44653072 ~ 44653468 (-)
G1178765 LOC100380669 other upstream 513491 44725639 ~ 44731351 (-)

Expression


Co-expression Network