Gene
RNA
| Item | Value |
|---|---|
| gene id | G1178030 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 44273061 ~ 44273273 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1343466 | True | 213 | lncRNA | 0.54 | 1 | 44273061 | 44273273 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485183 | LOC106607072 | coding | downstream | 48489 | 44222533 ~ 44224572 (-) |
| LOC110486489 | LOC106607084 | coding | downstream | 103911 | 44121355 ~ 44169150 (-) |
| LOC110486490 | NA | coding | downstream | 154818 | 44116040 ~ 44118663 (-) |
| tlcd4b | LOC106601359 | coding | downstream | 185409 | 44072439 ~ 44087652 (-) |
| LOC110486482 | cnn1 | coding | downstream | 205360 | 44053297 ~ 44067701 (-) |
| LOC110486496 | LOC106607078 | coding | upstream | 22303 | 44295576 ~ 44311575 (-) |
| LOC110486497 | LOC106601353 | coding | upstream | 46728 | 44320001 ~ 44342927 (-) |
| LOC110486499 | syfa | coding | upstream | 87141 | 44360414 ~ 44370469 (-) |
| LOC110486500 | LOC106601349 | coding | upstream | 104168 | 44377441 ~ 44397427 (-) |
| LOC110486501 | LOC106607073 | coding | upstream | 125804 | 44399077 ~ 44413719 (-) |
| G1178006 | NA | non-coding | downstream | 145 | 44233630 ~ 44272916 (-) |
| G1178005 | NA | non-coding | downstream | 40030 | 44232781 ~ 44233031 (-) |
| G1178001 | NA | non-coding | downstream | 46528 | 44226060 ~ 44226533 (-) |
| G1177994 | NA | non-coding | downstream | 57976 | 44214374 ~ 44215085 (-) |
| G1177981 | NA | non-coding | downstream | 62148 | 44210587 ~ 44210913 (-) |
| G1178035 | NA | non-coding | upstream | 5097 | 44278370 ~ 44278812 (-) |
| G1178039 | NA | non-coding | upstream | 10237 | 44283510 ~ 44283713 (-) |
| G1178224 | NA | non-coding | upstream | 70146 | 44343419 ~ 44343661 (-) |
| G1178229 | NA | non-coding | upstream | 78024 | 44351297 ~ 44352694 (-) |
| G1178235 | NA | non-coding | upstream | 97538 | 44370811 ~ 44371246 (-) |
| epor | LOC106601362 | other | downstream | 244076 | 44024053 ~ 44029014 (-) |
| zgc:158403 | LOC106601368 | other | downstream | 289494 | 43977147 ~ 43992248 (-) |
| G1177709 | LOC106601291 | other | downstream | 299004 | 43973539 ~ 43974057 (-) |
| G1177552 | NA | other | downstream | 657053 | 43601363 ~ 43647736 (-) |
| G1177238 | LOC106607096 | other | downstream | 857958 | 43414159 ~ 43415103 (-) |
| G1178281 | NA | other | upstream | 189681 | 44462954 ~ 44463226 (-) |
| LOC110485184 | LOC106601341 | other | upstream | 210349 | 44467268 ~ 44545484 (-) |
| G1178286 | LOC106607023 | other | upstream | 240163 | 44513436 ~ 44530531 (-) |
| G1178763 | LOC106607027 | other | upstream | 379799 | 44653072 ~ 44653468 (-) |
| G1178765 | LOC100380669 | other | upstream | 455303 | 44725639 ~ 44731351 (-) |
