G1178168


Basic Information

Item Value
gene id G1178168
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 44475548 ~ 44475841 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1343620
aaaattaaagtaTCGAGTGGCAGTGCATGTTTGAAGTCTCTAACTTCATACTCCATTGGAAAACAGTGAATTATGCAGCACAATTTGACAAAGGTCACATTATAACCCTATTCAGACGGGACTAGTATTAGCAGAGACGCTGGTTATGTAATTAATACACCAACATTTTAATTATTCCAGAGGACAATTCGCACGGTATACGTTTTAACAACTTGCAGCCTTTAATTCTTCATTTGTTTTCATTCAATTGACTCTTATGATGGAAGCCTGGAGGGTTTTATTCTAAGCGTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1343620 True 294 lncRNA 0.36 1 44475548 44475841

Neighbor

gene id symbol gene type direction distance location
LOC110486498 LOC106607075 coding upstream 123039 44344598 ~ 44352509 (+)
LOC118938310 NA coding upstream 161756 44313066 ~ 44313792 (+)
LOC110486495 LOC106601355 coding upstream 215543 44249312 ~ 44260005 (+)
LOC110486494 LOC106607080 coding upstream 231235 44240194 ~ 44244313 (+)
LOC110486493 LOC106601357 coding upstream 257550 44213199 ~ 44217998 (+)
tppc5 tppc5 coding downstream 18477 44494318 ~ 44496714 (+)
LOC110486502 LOC106607019 coding downstream 21125 44496966 ~ 44510125 (+)
LOC110486504 LOC106607023 coding downstream 37441 44513282 ~ 44545484 (+)
LOC110486506 LOC106607024 coding downstream 78606 44554447 ~ 44601022 (+)
engl LOC106607025 coding downstream 137065 44612906 ~ 44624369 (+)
G1178167 LOC106607005 non-coding upstream 690 44474582 ~ 44474858 (+)
G1178166 LOC106601342 non-coding upstream 3046 44472289 ~ 44472502 (+)
G1178165 LOC106601162 non-coding upstream 4064 44471199 ~ 44471484 (+)
G1178164 NA non-coding upstream 4937 44467272 ~ 44470611 (+)
G1178151 NA non-coding upstream 24517 44450815 ~ 44451031 (+)
G1178169 NA non-coding downstream 271 44476112 ~ 44476786 (+)
G1178170 NA non-coding downstream 3537 44479378 ~ 44479580 (+)
G1178139 LOC106607007 non-coding downstream 3886 44479727 ~ 44480100 (+)
G1178172 LOC106607007 non-coding downstream 4456 44480297 ~ 44480701 (+)
G1178316 NA non-coding downstream 77319 44553160 ~ 44553402 (+)
LOC110486491 LOC106607082 other upstream 269978 44174050 ~ 44211083 (+)
G1177750 NA other upstream 353626 44118878 ~ 44121922 (+)
LOC110486465 bglap other upstream 1067606 43406158 ~ 43407943 (+)
LOC110486464 mgp other upstream 1073268 43397744 ~ 43402308 (+)
LOC110485182 LOC106607095 other upstream 1210392 43259175 ~ 43265600 (+)
G1178363 NA other downstream 192227 44668068 ~ 44668459 (+)
G1178425 NA other downstream 384028 44859869 ~ 44864183 (+)
LOC110485188 LOC106601310 other downstream 444522 44878675 ~ 44943951 (+)
LOC110486526 smarca4 other downstream 491527 44967368 ~ 44996127 (+)
G1179156 NA other downstream 836489 45312330 ~ 45313033 (+)

Expression


Co-expression Network