G1178763 (LOC106607027)



Basic Information


Item Value
gene id G1178763
gene name LOC106607027
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 44653072 ~ 44653468 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1344299
CTGAGTGAGGTCATGTTGGCCACCTGTGCGGGGAGCTTGGCGTCTGAGATGAGCTCCAGCTTGAGCACCACCAGCTGGCTGAGGGTGAAGAGGGCGGGGGGCAGGCGCGGCAGGGCCACCAGCTGCAGCAGGGGCAGCTGCAGCTGCAGCTCGGAACCCCAGCGCCTCTCTAGGCTCTCCTCCAGCAGGCGTGTCTCGCTGACAGGTGACAGGAAGACGGAAAGGCGCTGGGCCAGTAGGGGGTCGTACTGGTCAGCCATGTGTAACAGGAAGGCCAGGTCATTACATAAGTCAGGGACATCCCTCATGGAGCCCAGCTCCCTCAGTTTGTTAAAGAAGTATTGACACAGGGAGCTGAGGGGTGCGCAACCACAAACATAGCACTGTATAGTTAACA

Function


NR:

description
volume-regulated anion channel subunit LRRC8D-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1344299 True 397 TUCP 0.60 1 44653072 44653468

Neighbor


gene id symbol gene type direction distance location
LOC118938082 LOC106607008 coding downstream 4040 44644651 ~ 44649032 (-)
LOC118938554 LOC106607008 coding downstream 9099 44642428 ~ 44643973 (-)
LOC110485185 LOC106607026 coding downstream 25647 44625249 ~ 44627425 (-)
LOC110486503 LOC106601345 coding downstream 155047 44488948 ~ 44498025 (-)
LOC110485184 LOC106601341 coding downstream 164958 44467268 ~ 44545484 (-)
si:ch211-106h11.3 LOC106601163 coding upstream 12295 44665763 ~ 44672951 (-)
LOC110486512 LOC106607029 coding upstream 24411 44677879 ~ 44681904 (-)
LOC110486518 LOC106601332 coding upstream 119134 44772602 ~ 44774634 (-)
hook2 LOC106607036 coding upstream 133467 44786935 ~ 44803227 (-)
tdx tdx coding upstream 197110 44850578 ~ 44852940 (-)
G1178754 NA non-coding downstream 13917 44638821 ~ 44639155 (-)
G1178751 NA non-coding downstream 19307 44633546 ~ 44633765 (-)
G1178726 NA non-coding downstream 52035 44599893 ~ 44601037 (-)
G1178730 LOC106607024 non-coding downstream 58102 44594549 ~ 44594970 (-)
G1178295 NA non-coding downstream 161957 44490844 ~ 44491115 (-)
G1178764 NA non-coding upstream 2296 44655764 ~ 44656561 (-)
G1178725 LOC106587357 non-coding upstream 4879 44658347 ~ 44659332 (-)
G1178767 NA non-coding upstream 69595 44723063 ~ 44724011 (-)
G1178765 LOC100380669 non-coding upstream 72171 44725639 ~ 44731351 (-)
G1178286 LOC106607023 other downstream 122541 44513436 ~ 44530531 (-)
G1178281 NA other downstream 189846 44462954 ~ 44463226 (-)
epor LOC106601362 other downstream 624087 44024053 ~ 44029014 (-)
zgc:158403 LOC106601368 other downstream 669505 43977147 ~ 43992248 (-)
G1178958 LOC106607010 other upstream 315742 44969210 ~ 44981200 (-)
G1178982 LOC106607046 other upstream 373047 45026515 ~ 45028613 (-)
G1178996 NA other upstream 398108 45051576 ~ 45052024 (-)
il-8 il-8 other upstream 432041 45085269 ~ 45087130 (-)

Expression



Co-expression Network