Gene
RNA
| Item | Value |
|---|---|
| gene id | G1178362 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 44667613 ~ 44667922 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1343860 | True | 310 | lncRNA | 0.40 | 1 | 44667613 | 44667922 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486510 | ddx39 | coding | upstream | 4048 | 44656990 ~ 44663565 (+) |
| LOC110486509 | LOC106607027 | coding | upstream | 13875 | 44649848 ~ 44653738 (+) |
| engl | LOC106607025 | coding | upstream | 43868 | 44612906 ~ 44624369 (+) |
| LOC110486506 | LOC106607024 | coding | upstream | 66591 | 44554447 ~ 44601022 (+) |
| LOC110486504 | LOC106607023 | coding | upstream | 122129 | 44513282 ~ 44545484 (+) |
| LOC110486513 | LOC106601338 | coding | downstream | 14134 | 44682056 ~ 44690065 (+) |
| LOC110486511 | LOC100380669 | coding | downstream | 31613 | 44699535 ~ 44731365 (+) |
| LOC110486514 | LOC106601335 | coding | downstream | 63776 | 44731698 ~ 44737852 (+) |
| LOC110486515 | LOC106586974 | coding | downstream | 73847 | 44741769 ~ 44748633 (+) |
| LOC110486517 | LOC106607033 | coding | downstream | 85085 | 44753007 ~ 44760092 (+) |
| G1178360 | NA | non-coding | upstream | 2162 | 44664952 ~ 44665451 (+) |
| G1178358 | LOC106607027 | non-coding | upstream | 11008 | 44654407 ~ 44656605 (+) |
| G1178349 | NA | non-coding | upstream | 41764 | 44625581 ~ 44625849 (+) |
| G1178343 | NA | non-coding | upstream | 55357 | 44612166 ~ 44612256 (+) |
| G1178364 | NA | non-coding | downstream | 1316 | 44669238 ~ 44685080 (+) |
| G1178409 | NA | non-coding | downstream | 114478 | 44782400 ~ 44782626 (+) |
| G1178410 | NA | non-coding | downstream | 115256 | 44783178 ~ 44784430 (+) |
| G1178411 | NA | non-coding | downstream | 117481 | 44785403 ~ 44785611 (+) |
| G1178444 | NA | non-coding | downstream | 168708 | 44836630 ~ 44836912 (+) |
| LOC110486491 | LOC106607082 | other | upstream | 462043 | 44174050 ~ 44211083 (+) |
| G1177750 | NA | other | upstream | 545691 | 44118878 ~ 44121922 (+) |
| LOC110486465 | bglap | other | upstream | 1259671 | 43406158 ~ 43407943 (+) |
| LOC110486464 | mgp | other | upstream | 1265333 | 43397744 ~ 43402308 (+) |
| LOC110485182 | LOC106607095 | other | upstream | 1402457 | 43259175 ~ 43265600 (+) |
| G1178363 | NA | other | downstream | 146 | 44668068 ~ 44668459 (+) |
| G1178425 | NA | other | downstream | 191947 | 44859869 ~ 44864183 (+) |
| LOC110485188 | LOC106601310 | other | downstream | 252441 | 44878675 ~ 44943951 (+) |
| LOC110486526 | smarca4 | other | downstream | 299446 | 44967368 ~ 44996127 (+) |
| G1179156 | NA | other | downstream | 644408 | 45312330 ~ 45313033 (+) |
