G1178831


Basic Information

Item Value
gene id G1178831
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 44783437 ~ 44784245 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1344394
ACTGCTTAAATATATTGGAAATTAACAGTGTCTGTTAGACATATATGCCAGTACCAACATTTGCAGTATGAAATGTTGGCACTggcaatatacactacatgacaaactgtggacacctgctcgtcaaacatctcattacaaaatcatgggcattaatatggacttggtcccccttttgctataacagcctccactcttctaggaaggctttccactagatattggaacatttgCTGCATGGATTGGCTTCCATttagccacgagcattagtgaggttgggcgattcgacctggctcgcagtctgcgttccaattcatcccaaaggtgttcgatggggttgaggtcagactGCAGGCAGGCCAgattcttccacactgatctcaacaaaccatttctgtatggacctcactttgtgcacaggggcattgtcatgctgaaacgggaaagggccgtccccaaactgttgccacaaagttggaagcactgaatcatctagaatatcattgtatgctgtagcgttaagatttcccttcactggaactcagGGGCCCGAACCAGGaaaaaacagcccaagaccattattcctcttccaccaaactgtacagttAGCACTATGTATTAGGGCAGGTAGCGTTATCCTGGTATCCGTGAAACCCAGATTTGGCCGCCttagacttgttggaaaggtagcgtcctatgacagtgccacgttgaaagtccctGAGCACTTCCgttaggccattctactgccaatgtttgtctatggagatttcatggctaTGTGCTCAACTTAATAAACCTTTATAAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1344394 True 809 lncRNA 0.45 1 44783437 44784245

Neighbor

gene id symbol gene type direction distance location
LOC110486518 LOC106601332 coding downstream 8803 44772602 ~ 44774634 (-)
LOC110486512 LOC106607029 coding downstream 101533 44677879 ~ 44681904 (-)
si:ch211-106h11.3 LOC106601163 coding downstream 110486 44665763 ~ 44672951 (-)
LOC118938082 LOC106607008 coding downstream 134405 44644651 ~ 44649032 (-)
LOC118938554 LOC106607008 coding downstream 139464 44642428 ~ 44643973 (-)
hook2 LOC106607036 coding upstream 2690 44786935 ~ 44803227 (-)
tdx tdx coding upstream 66333 44850578 ~ 44852940 (-)
LOC110486521 rbp coding upstream 72692 44856937 ~ 44864226 (-)
LOC110486524 LOC106607044 coding upstream 171329 44955574 ~ 44959660 (-)
LOC110486528 LOC106607047 coding upstream 245519 45029764 ~ 45034405 (-)
G1178771 NA non-coding downstream 42372 44740654 ~ 44741065 (-)
G1178765 LOC100380669 non-coding downstream 52086 44725639 ~ 44731351 (-)
G1178767 NA non-coding downstream 59426 44723063 ~ 44724011 (-)
G1178833 NA non-coding upstream 1791 44786036 ~ 44831509 (-)
G1178867 NA non-coding upstream 50566 44834811 ~ 44835134 (-)
G1178863 NA non-coding upstream 53335 44837580 ~ 44837815 (-)
G1178862 NA non-coding upstream 62502 44846747 ~ 44847006 (-)
G1178873 NA non-coding upstream 63798 44848043 ~ 44848333 (-)
G1178763 LOC106607027 other downstream 129969 44653072 ~ 44653468 (-)
LOC110485184 LOC106601341 other downstream 237953 44467268 ~ 44545484 (-)
G1178286 LOC106607023 other downstream 252906 44513436 ~ 44530531 (-)
G1178281 NA other downstream 320211 44462954 ~ 44463226 (-)
G1178958 LOC106607010 other upstream 184965 44969210 ~ 44981200 (-)
G1178982 LOC106607046 other upstream 242270 45026515 ~ 45028613 (-)
G1178996 NA other upstream 267331 45051576 ~ 45052024 (-)
il-8 il-8 other upstream 301264 45085269 ~ 45087130 (-)
zgc:171844 LOC106607059 other upstream 399215 45182660 ~ 45193315 (-)

Expression


Co-expression Network