G1178448


Basic Information

Item Value
gene id G1178448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 44839948 ~ 44840170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1343949
gcatgtcagagcaaaatccaagccatgatgttgaaggaattgtccatagagctccgagataggattgtgtcgaggcacagatctggggaatggtataaaaaatatctgcagcattgaaggtctccaagaacacagtggcctccatcattcttaattggaagaagtttggaaacaccaagactcttcccagaactagctgcctggccaaactgggcaatcgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1343949 True 223 lncRNA 0.47 1 44839948 44840170

Neighbor

gene id symbol gene type direction distance location
LOC110486516 NA coding upstream 67624 44760430 ~ 44772324 (+)
LOC110486517 LOC106607033 coding upstream 79856 44753007 ~ 44760092 (+)
LOC110486515 LOC106586974 coding upstream 91315 44741769 ~ 44748633 (+)
LOC110486514 LOC106601335 coding upstream 102096 44731698 ~ 44737852 (+)
LOC110486511 LOC100380669 coding upstream 108583 44699535 ~ 44731365 (+)
LOC110486520 LOC106607037 coding downstream 4981 44845151 ~ 44847008 (+)
LOC110485188 LOC106601310 coding downstream 38544 44878675 ~ 44943951 (+)
LOC110486523 LOC106607042 coding downstream 104279 44944449 ~ 44956000 (+)
LOC110486526 smarca4 coding downstream 127519 44967368 ~ 44996127 (+)
LOC100135849 LOC106607045 coding downstream 161388 45001558 ~ 45015370 (+)
G1178445 NA non-coding upstream 2698 44837017 ~ 44837250 (+)
G1178444 NA non-coding upstream 3036 44836630 ~ 44836912 (+)
G1178411 NA non-coding upstream 54337 44785403 ~ 44785611 (+)
G1178410 NA non-coding upstream 55518 44783178 ~ 44784430 (+)
G1178409 NA non-coding upstream 57322 44782400 ~ 44782626 (+)
G1178491 NA non-coding downstream 51120 44891290 ~ 44891571 (+)
G1178499 NA non-coding downstream 60161 44900331 ~ 44900634 (+)
G1178500 NA non-coding downstream 60727 44900897 ~ 44901230 (+)
G1178502 NA non-coding downstream 62915 44903085 ~ 44903721 (+)
G1178363 NA other upstream 171489 44668068 ~ 44668459 (+)
LOC110486491 LOC106607082 other upstream 634378 44174050 ~ 44211083 (+)
G1177750 NA other upstream 718026 44118878 ~ 44121922 (+)
LOC110486465 bglap other upstream 1432006 43406158 ~ 43407943 (+)
LOC110486464 mgp other upstream 1437668 43397744 ~ 43402308 (+)
G1178425 NA other downstream 19699 44859869 ~ 44864183 (+)
G1179156 NA other downstream 472160 45312330 ~ 45313033 (+)
G1179362 NA other downstream 622418 45462588 ~ 45462943 (+)

Expression


Co-expression Network