Gene
RNA
| Item | Value |
|---|---|
| gene id | G1178882 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 44864450 ~ 44864801 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1344449 | True | 352 | lncRNA | 0.45 | 1 | 44864450 | 44864801 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486521 | rbp | coding | downstream | 224 | 44856937 ~ 44864226 (-) |
| tdx | tdx | coding | downstream | 11777 | 44850578 ~ 44852940 (-) |
| hook2 | LOC106607036 | coding | downstream | 61223 | 44786935 ~ 44803227 (-) |
| LOC110486518 | LOC106601332 | coding | downstream | 89816 | 44772602 ~ 44774634 (-) |
| LOC110486512 | LOC106607029 | coding | downstream | 182546 | 44677879 ~ 44681904 (-) |
| LOC110486524 | LOC106607044 | coding | upstream | 90773 | 44955574 ~ 44959660 (-) |
| LOC110486528 | LOC106607047 | coding | upstream | 164963 | 45029764 ~ 45034405 (-) |
| il-8 | il-8 | coding | upstream | 220468 | 45085269 ~ 45087130 (-) |
| LOC110486532 | LOC106607051 | coding | upstream | 268228 | 45133029 ~ 45135645 (-) |
| LOC110486530 | LOC106601319 | coding | upstream | 271955 | 45136756 ~ 45143108 (-) |
| G1178878 | NA | non-coding | downstream | 10606 | 44853610 ~ 44853844 (-) |
| G1178873 | NA | non-coding | downstream | 16117 | 44848043 ~ 44848333 (-) |
| G1178862 | NA | non-coding | downstream | 17444 | 44846747 ~ 44847006 (-) |
| G1178863 | NA | non-coding | downstream | 26635 | 44837580 ~ 44837815 (-) |
| G1178885 | NA | non-coding | upstream | 3998 | 44868799 ~ 44869049 (-) |
| G1178891 | NA | non-coding | upstream | 13127 | 44877928 ~ 44878129 (-) |
| G1178913 | NA | non-coding | upstream | 40502 | 44905303 ~ 44905532 (-) |
| G1178919 | NA | non-coding | upstream | 46424 | 44911225 ~ 44911569 (-) |
| G1178924 | NA | non-coding | upstream | 53591 | 44918392 ~ 44918617 (-) |
| G1178765 | LOC100380669 | other | downstream | 133099 | 44725639 ~ 44731351 (-) |
| G1178763 | LOC106607027 | other | downstream | 210982 | 44653072 ~ 44653468 (-) |
| LOC110485184 | LOC106601341 | other | downstream | 318966 | 44467268 ~ 44545484 (-) |
| G1178286 | LOC106607023 | other | downstream | 333919 | 44513436 ~ 44530531 (-) |
| G1178281 | NA | other | downstream | 401224 | 44462954 ~ 44463226 (-) |
| G1178958 | LOC106607010 | other | upstream | 104409 | 44969210 ~ 44981200 (-) |
| G1178982 | LOC106607046 | other | upstream | 161714 | 45026515 ~ 45028613 (-) |
| G1178996 | NA | other | upstream | 186775 | 45051576 ~ 45052024 (-) |
| zgc:171844 | LOC106607059 | other | upstream | 318659 | 45182660 ~ 45193315 (-) |
