G1178996


Basic Information

Item Value
gene id G1178996
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45051576 ~ 45052024 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1344593
atcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgcaacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaatgttatgtttggcgtaaaagcaacacagctgaacacaccatccccattgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgattggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1344593 True 449 TUCP 0.42 1 45051576 45052024

Neighbor

gene id symbol gene type direction distance location
LOC110486528 LOC106607047 coding downstream 17171 45029764 ~ 45034405 (-)
LOC110486524 LOC106607044 coding downstream 91916 44955574 ~ 44959660 (-)
LOC110486521 rbp coding downstream 187350 44856937 ~ 44864226 (-)
tdx tdx coding downstream 198903 44850578 ~ 44852940 (-)
hook2 LOC106607036 coding downstream 248349 44786935 ~ 44803227 (-)
il-8 il-8 coding upstream 33245 45085269 ~ 45087130 (-)
LOC110486532 LOC106607051 coding upstream 81005 45133029 ~ 45135645 (-)
LOC110486530 LOC106601319 coding upstream 84732 45136756 ~ 45143108 (-)
ankrd54 LOC106607054 coding upstream 91304 45143328 ~ 45145991 (-)
LOC110485190 LOC106601322 coding upstream 96540 45148564 ~ 45150974 (-)
G1178980 LOC106601324 non-coding downstream 29829 45020298 ~ 45021747 (-)
G1178974 NA non-coding downstream 36831 45012785 ~ 45014745 (-)
G1178962 NA non-coding downstream 55573 44994826 ~ 44996003 (-)
G1178959 smarca4 non-coding downstream 60983 44988969 ~ 44990593 (-)
G1178946 LOC106607042 non-coding downstream 89693 44946191 ~ 44961883 (-)
G1179064 NA non-coding upstream 94440 45146464 ~ 45146663 (-)
G1179069 NA non-coding upstream 122915 45174939 ~ 45175366 (-)
G1179074 NA non-coding upstream 127337 45179361 ~ 45179568 (-)
G1179056 NA non-coding upstream 129400 45181424 ~ 45181741 (-)
pik3r6b NA non-coding upstream 149348 45200981 ~ 45213655 (-)
G1178982 LOC106607046 other downstream 22963 45026515 ~ 45028613 (-)
G1178958 LOC106607010 other downstream 70376 44969210 ~ 44981200 (-)
G1178765 LOC100380669 other downstream 320225 44725639 ~ 44731351 (-)
G1178763 LOC106607027 other downstream 398108 44653072 ~ 44653468 (-)
LOC110485184 LOC106601341 other downstream 506092 44467268 ~ 44545484 (-)
zgc:171844 LOC106607059 other upstream 131436 45182660 ~ 45193315 (-)
G1179619 LOC106601391 other upstream 477412 45529436 ~ 45530114 (-)
G1179621 LOC106607015 other upstream 479834 45531858 ~ 45532662 (-)
LOC110486586 ubald2 other upstream 1461433 46510585 ~ 46535713 (-)

Expression


Co-expression Network