G1179119



Basic Information


Item Value
gene id G1179119
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45269044 ~ 45269384 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1344724
tgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatctaggtgttagaatggccaagtcaaagtccagaactgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacatcactgagctcgagctgttttgcaaggaggaatgggaaaaaatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaactta

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1344724 True 341 lncRNA 0.41 1 45269044 45269384

Neighbor


gene id symbol gene type direction distance location
pik3r6b NA coding downstream 55389 45200981 ~ 45213655 (-)
LOC110485191 LOC106601377 coding downstream 73067 45194711 ~ 45195977 (-)
zgc:171844 LOC106607059 coding downstream 75729 45182660 ~ 45193315 (-)
tom1 LOC106607057 coding downstream 95022 45166694 ~ 45174022 (-)
gcat gcat coding downstream 103625 45159814 ~ 45165419 (-)
LOC110486542 LOC106608160 coding upstream 31349 45300733 ~ 45333032 (-)
mchr1b LOC106601409 coding upstream 211616 45481000 ~ 45484678 (-)
trnas-aga-60 NA coding upstream 257205 45526589 ~ 45526670 (-)
LOC100135782 LOC106607000 coding upstream 382512 45651896 ~ 45654777 (-)
LOC110486550 LOC106601398 coding upstream 385514 45654898 ~ 45677812 (-)
G1179106 NA non-coding downstream 637 45267333 ~ 45268407 (-)
G1179056 NA non-coding downstream 87303 45181424 ~ 45181741 (-)
G1179074 NA non-coding downstream 89476 45179361 ~ 45179568 (-)
G1179069 NA non-coding downstream 93678 45174939 ~ 45175366 (-)
G1179121 NA non-coding upstream 508 45269892 ~ 45270099 (-)
G1179208 NA non-coding upstream 75831 45345215 ~ 45345426 (-)
G1179209 NA non-coding upstream 83186 45352570 ~ 45352902 (-)
G1179344 NA non-coding upstream 173853 45443237 ~ 45443576 (-)
G1179346 NA non-coding upstream 174857 45444241 ~ 45445439 (-)
il-8 il-8 other downstream 181914 45085269 ~ 45087130 (-)
G1178996 NA other downstream 217020 45051576 ~ 45052024 (-)
G1178982 LOC106607046 other downstream 240431 45026515 ~ 45028613 (-)
G1178958 LOC106607010 other downstream 287844 44969210 ~ 44981200 (-)
G1179619 LOC106601391 other upstream 260052 45529436 ~ 45530114 (-)
G1179621 LOC106607015 other upstream 262474 45531858 ~ 45532662 (-)
LOC110486586 ubald2 other upstream 1244073 46510585 ~ 46535713 (-)
LOC110486590 LOC105022923 other upstream 1614044 46827752 ~ 46915018 (-)
LOC110486593 LOC106606954 other upstream 2163412 47432406 ~ 47433949 (-)

Expression



Co-expression Network