Gene
RNA
| Item | Value |
|---|---|
| gene id | G1179151 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45300753 ~ 45343077 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1344758 | True | 287 | lncRNA | 0.33 | 2 | 45300753 | 45343077 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486541 | LOC106607062 | coding | upstream | 32333 | 45223469 ~ 45268420 (+) |
| hmox1a | LOC106607056 | coding | upstream | 146021 | 45152082 ~ 45154732 (+) |
| LOC110486534 | NA | coding | upstream | 159813 | 45135680 ~ 45140940 (+) |
| zgc:162612 | LOC106607050 | coding | upstream | 185606 | 45111643 ~ 45115147 (+) |
| LOC110486529 | LOC106607046 | coding | upstream | 272133 | 45026189 ~ 45028620 (+) |
| usp43b | LOC106601383 | coding | downstream | 15662 | 45358739 ~ 45451742 (+) |
| LOC110486545 | grb2 | coding | downstream | 141721 | 45484798 ~ 45524322 (+) |
| trnas-aga-61 | NA | coding | downstream | 183728 | 45526805 ~ 45526886 (+) |
| LOC110485192 | LOC106601391 | coding | downstream | 186321 | 45529398 ~ 45554103 (+) |
| LOC110486547 | LOC106607066 | coding | downstream | 212741 | 45555818 ~ 45559601 (+) |
| G1179130 | NA | non-coding | upstream | 25115 | 45275408 ~ 45275638 (+) |
| G1178658 | NA | non-coding | upstream | 99683 | 45200225 ~ 45201070 (+) |
| G1178655 | NA | non-coding | upstream | 106511 | 45194005 ~ 45194242 (+) |
| G1178631 | NA | non-coding | upstream | 132581 | 45167276 ~ 45168172 (+) |
| G1179178 | NA | non-coding | downstream | 9381 | 45352458 ~ 45352905 (+) |
| G1179259 | NA | non-coding | downstream | 74923 | 45418000 ~ 45426391 (+) |
| G1179214 | NA | non-coding | downstream | 110882 | 45453959 ~ 45455862 (+) |
| G1179350 | NA | non-coding | downstream | 113457 | 45456534 ~ 45456776 (+) |
| G1179352 | NA | non-coding | downstream | 114530 | 45457607 ~ 45457815 (+) |
| LOC110486526 | smarca4 | other | upstream | 331034 | 44967368 ~ 44996127 (+) |
| LOC110485188 | LOC106601310 | other | upstream | 374436 | 44878675 ~ 44943951 (+) |
| G1178425 | NA | other | upstream | 436570 | 44859869 ~ 44864183 (+) |
| G1178363 | NA | other | upstream | 632294 | 44668068 ~ 44668459 (+) |
| LOC110486491 | LOC106607082 | other | upstream | 1095183 | 44174050 ~ 44211083 (+) |
| G1179362 | NA | other | downstream | 119511 | 45462588 ~ 45462943 (+) |
| LOC118936304 | LOC106601427 | other | downstream | 830951 | 46173911 ~ 46176562 (+) |
| G1180047 | NA | other | downstream | 896067 | 46239144 ~ 46273601 (+) |
| LOC110485193 | LOC106601421 | other | downstream | 988641 | 46302751 ~ 46336386 (+) |
