G1179156


Basic Information

Item Value
gene id G1179156
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45312330 ~ 45313033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1344763
tgcccacttcactgttgctccaagcagaggaaactgcagttatGCCTGAAGCCCACACATGCCGCagcatacatgttggaccccaagtatgctggcaagagtatcctgtctggtgcagagatcaacaaggcctatggtgccATCACTACCGtatctcgccaccttggcctggatgagggcaaggttcttggcagacTGGCGAAGCACACATCCAAGCAAGGgatttgggatggagatgcaatatggcagtcgtgccaacatatctcatcagccacctggcactttcccctgttgcctccatcatcctccaaatcccaccaacatcagccgtctcagagcgcaactggtccttgtttgggaacacacaccaaagcacgcaacaggctgaccaatgcaaggattgaaaaattggtggccatctggACAaatttgagcctgacaacgagctaTCCTCAACATGGTTGGAAAGCCCTCAGAGTCTTATGTTCAAGTGGTGGACACTGAGGAGGTCgagggagaagacatggaggcatgagaggaagacaaccaaagctttagcttttagactatcattttacagatgtatgttgaaaacatttttgggagatgctatggatcattggggataattcaacatttattttgttgttcagtgaaatcattccatgtgaagagtcaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC109200594

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1344763 True 679 TUCP 0.48 2 45312330 45313033
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110486541 LOC106607062 coding upstream 43910 45223469 ~ 45268420 (+)
hmox1a LOC106607056 coding upstream 157598 45152082 ~ 45154732 (+)
LOC110486534 NA coding upstream 171390 45135680 ~ 45140940 (+)
zgc:162612 LOC106607050 coding upstream 197183 45111643 ~ 45115147 (+)
LOC110486529 LOC106607046 coding upstream 283710 45026189 ~ 45028620 (+)
usp43b LOC106601383 coding downstream 45706 45358739 ~ 45451742 (+)
LOC110486545 grb2 coding downstream 171765 45484798 ~ 45524322 (+)
trnas-aga-61 NA coding downstream 213772 45526805 ~ 45526886 (+)
LOC110485192 LOC106601391 coding downstream 216365 45529398 ~ 45554103 (+)
LOC110486547 LOC106607066 coding downstream 242785 45555818 ~ 45559601 (+)
G1179130 NA non-coding upstream 36692 45275408 ~ 45275638 (+)
G1178658 NA non-coding upstream 111260 45200225 ~ 45201070 (+)
G1178655 NA non-coding upstream 118088 45194005 ~ 45194242 (+)
G1178631 NA non-coding upstream 144158 45167276 ~ 45168172 (+)
G1179178 NA non-coding downstream 39425 45352458 ~ 45352905 (+)
G1179259 NA non-coding downstream 104967 45418000 ~ 45426391 (+)
G1179214 NA non-coding downstream 140926 45453959 ~ 45455862 (+)
G1179350 NA non-coding downstream 143501 45456534 ~ 45456776 (+)
G1179352 NA non-coding downstream 144574 45457607 ~ 45457815 (+)
LOC110486526 smarca4 other upstream 342611 44967368 ~ 44996127 (+)
LOC110485188 LOC106601310 other upstream 386013 44878675 ~ 44943951 (+)
G1178425 NA other upstream 448147 44859869 ~ 44864183 (+)
G1178363 NA other upstream 643871 44668068 ~ 44668459 (+)
LOC110486491 LOC106607082 other upstream 1106760 44174050 ~ 44211083 (+)
G1179362 NA other downstream 149555 45462588 ~ 45462943 (+)
LOC118936304 LOC106601427 other downstream 860995 46173911 ~ 46176562 (+)
G1180047 NA other downstream 926111 46239144 ~ 46273601 (+)
LOC110485193 LOC106601421 other downstream 1018685 46302751 ~ 46336386 (+)

Expression

G1179156 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G1179156 Expression in each Bioproject

Bar chart with 20 bars.
G1179156 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network