Gene
RNA
| Item | Value |
|---|---|
| gene id | G1179344 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45443237 ~ 45443576 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1344978 | True | 300 | lncRNA | 0.54 | 2 | 45443237 | 45443576 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486542 | LOC106608160 | coding | downstream | 110205 | 45300733 ~ 45333032 (-) |
| pik3r6b | NA | coding | downstream | 229582 | 45200981 ~ 45213655 (-) |
| LOC110485191 | LOC106601377 | coding | downstream | 247260 | 45194711 ~ 45195977 (-) |
| zgc:171844 | LOC106607059 | coding | downstream | 249922 | 45182660 ~ 45193315 (-) |
| tom1 | LOC106607057 | coding | downstream | 269215 | 45166694 ~ 45174022 (-) |
| mchr1b | LOC106601409 | coding | upstream | 37424 | 45481000 ~ 45484678 (-) |
| trnas-aga-60 | NA | coding | upstream | 83013 | 45526589 ~ 45526670 (-) |
| LOC100135782 | LOC106607000 | coding | upstream | 208320 | 45651896 ~ 45654777 (-) |
| LOC110486550 | LOC106601398 | coding | upstream | 211322 | 45654898 ~ 45677812 (-) |
| LOC110486551 | fbf1 | coding | upstream | 237282 | 45680858 ~ 45692892 (-) |
| G1179209 | NA | non-coding | downstream | 90335 | 45352570 ~ 45352902 (-) |
| G1179208 | NA | non-coding | downstream | 97811 | 45345215 ~ 45345426 (-) |
| G1179121 | NA | non-coding | downstream | 173138 | 45269892 ~ 45270099 (-) |
| G1179119 | NA | non-coding | downstream | 173853 | 45269044 ~ 45269384 (-) |
| G1179106 | NA | non-coding | downstream | 174830 | 45267333 ~ 45268407 (-) |
| G1179346 | NA | non-coding | upstream | 665 | 45444241 ~ 45445439 (-) |
| G1179318 | NA | non-coding | upstream | 10383 | 45453959 ~ 45455854 (-) |
| G1179625 | NA | non-coding | upstream | 94692 | 45538268 ~ 45538793 (-) |
| G1179630 | NA | non-coding | upstream | 104247 | 45547823 ~ 45548058 (-) |
| G1179629 | NA | non-coding | upstream | 104949 | 45548525 ~ 45549374 (-) |
| il-8 | il-8 | other | downstream | 356107 | 45085269 ~ 45087130 (-) |
| G1178996 | NA | other | downstream | 391213 | 45051576 ~ 45052024 (-) |
| G1178982 | LOC106607046 | other | downstream | 414624 | 45026515 ~ 45028613 (-) |
| G1178958 | LOC106607010 | other | downstream | 462037 | 44969210 ~ 44981200 (-) |
| G1179619 | LOC106601391 | other | upstream | 85860 | 45529436 ~ 45530114 (-) |
| G1179621 | LOC106607015 | other | upstream | 88282 | 45531858 ~ 45532662 (-) |
| LOC110486586 | ubald2 | other | upstream | 1069881 | 46510585 ~ 46535713 (-) |
| LOC110486590 | LOC105022923 | other | upstream | 1439852 | 46827752 ~ 46915018 (-) |
| LOC110486593 | LOC106606954 | other | upstream | 1989220 | 47432406 ~ 47433949 (-) |
