G1179352


Basic Information

Item Value
gene id G1179352
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45457607 ~ 45457815 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1344987
cctagccctaagaagttttaagttccttgctcagaacatatgaaagctggtggttcaatattcccagttcttcaatattcccagttaagaagtttcaGGTAGTAGTTATTATAGAAATTTTGACGtgttgactatttctctctataccatttgtatttcatatacttttgactattggatgttctaataggcactttagtattgccagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1344987 True 209 lncRNA 0.34 1 45457607 45457815

Neighbor

gene id symbol gene type direction distance location
usp43b LOC106601383 coding upstream 5865 45358739 ~ 45451742 (+)
LOC110486541 LOC106607062 coding upstream 189187 45223469 ~ 45268420 (+)
hmox1a LOC106607056 coding upstream 302875 45152082 ~ 45154732 (+)
LOC110486534 NA coding upstream 316667 45135680 ~ 45140940 (+)
zgc:162612 LOC106607050 coding upstream 342460 45111643 ~ 45115147 (+)
LOC110486545 grb2 coding downstream 26983 45484798 ~ 45524322 (+)
trnas-aga-61 NA coding downstream 68990 45526805 ~ 45526886 (+)
LOC110485192 LOC106601391 coding downstream 71583 45529398 ~ 45554103 (+)
LOC110486547 LOC106607066 coding downstream 98003 45555818 ~ 45559601 (+)
LOC110486546 LOC106601396 coding downstream 102119 45559934 ~ 45614619 (+)
G1179350 NA non-coding upstream 831 45456534 ~ 45456776 (+)
G1179214 NA non-coding upstream 1745 45453959 ~ 45455862 (+)
G1179259 NA non-coding upstream 31216 45418000 ~ 45426391 (+)
G1179178 NA non-coding upstream 104702 45352458 ~ 45352905 (+)
G1179151 NA non-coding upstream 114530 45300753 ~ 45343077 (+)
G1179359 NA non-coding downstream 3687 45461502 ~ 45461701 (+)
G1179360 NA non-coding downstream 4238 45462053 ~ 45462305 (+)
G1179369 NA non-coding downstream 13370 45471185 ~ 45471415 (+)
G1179402 NA non-coding downstream 74903 45532718 ~ 45532950 (+)
G1179446 NA non-coding downstream 195952 45653767 ~ 45654496 (+)
G1179156 NA other upstream 144574 45312330 ~ 45313033 (+)
LOC110486526 smarca4 other upstream 487888 44967368 ~ 44996127 (+)
LOC110485188 LOC106601310 other upstream 531290 44878675 ~ 44943951 (+)
G1178425 NA other upstream 593424 44859869 ~ 44864183 (+)
G1178363 NA other upstream 789148 44668068 ~ 44668459 (+)
G1179362 NA other downstream 4773 45462588 ~ 45462943 (+)
LOC118936304 LOC106601427 other downstream 716213 46173911 ~ 46176562 (+)
G1180047 NA other downstream 781329 46239144 ~ 46273601 (+)
LOC110485193 LOC106601421 other downstream 873903 46302751 ~ 46336386 (+)

Expression


Co-expression Network