G1179369


Basic Information

Item Value
gene id G1179369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45471185 ~ 45471415 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1345004
gttttagagtagtggcttcttcctaaccttcagcttatgtcgatataggactcattttactgtggatatatatacttttgtacctgtttcctccagcatcttcacaaggtcctttgttgttgttctgggattgatttgcacttttcgcaccaaagtactcatctctaggagacagaatgtgtctccttcctgagtggtatgacggctgagcaggtcccatggtgttaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1345004 True 231 lncRNA 0.42 1 45471185 45471415

Neighbor

gene id symbol gene type direction distance location
usp43b LOC106601383 coding upstream 19443 45358739 ~ 45451742 (+)
LOC110486541 LOC106607062 coding upstream 202765 45223469 ~ 45268420 (+)
hmox1a LOC106607056 coding upstream 316453 45152082 ~ 45154732 (+)
LOC110486534 NA coding upstream 330245 45135680 ~ 45140940 (+)
zgc:162612 LOC106607050 coding upstream 356038 45111643 ~ 45115147 (+)
LOC110486545 grb2 coding downstream 13383 45484798 ~ 45524322 (+)
trnas-aga-61 NA coding downstream 55390 45526805 ~ 45526886 (+)
LOC110485192 LOC106601391 coding downstream 57983 45529398 ~ 45554103 (+)
LOC110486547 LOC106607066 coding downstream 84403 45555818 ~ 45559601 (+)
LOC110486546 LOC106601396 coding downstream 88519 45559934 ~ 45614619 (+)
G1179360 NA non-coding upstream 8880 45462053 ~ 45462305 (+)
G1179359 NA non-coding upstream 9484 45461502 ~ 45461701 (+)
G1179352 NA non-coding upstream 13370 45457607 ~ 45457815 (+)
G1179350 NA non-coding upstream 14409 45456534 ~ 45456776 (+)
G1179214 NA non-coding upstream 15323 45453959 ~ 45455862 (+)
G1179402 NA non-coding downstream 61303 45532718 ~ 45532950 (+)
G1179446 NA non-coding downstream 182352 45653767 ~ 45654496 (+)
G1179445 NA non-coding downstream 183612 45655027 ~ 45656039 (+)
G1179448 NA non-coding downstream 191447 45662862 ~ 45663122 (+)
G1179452 NA non-coding downstream 198145 45669560 ~ 45669987 (+)
G1179362 NA other upstream 8242 45462588 ~ 45462943 (+)
G1179156 NA other upstream 158152 45312330 ~ 45313033 (+)
LOC110486526 smarca4 other upstream 501466 44967368 ~ 44996127 (+)
LOC110485188 LOC106601310 other upstream 544868 44878675 ~ 44943951 (+)
G1178425 NA other upstream 607002 44859869 ~ 44864183 (+)
LOC118936304 LOC106601427 other downstream 702613 46173911 ~ 46176562 (+)
G1180047 NA other downstream 767729 46239144 ~ 46273601 (+)
LOC110485193 LOC106601421 other downstream 860303 46302751 ~ 46336386 (+)
G1181472 NA other downstream 1902748 47374163 ~ 47374477 (+)

Expression


Co-expression Network