G1179619 (LOC106601391)


Basic Information

Item Value
gene id G1179619
gene name LOC106601391
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45529436 ~ 45530114 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1345280
GAGTGCTGCCATGAGTGCTCTGACTCCGAAAGCTGCTTTCAGTACAGTAGCTGGCATCATCATCCTCCTCGAGTATTTCCTCAAGCGGGTCTGACTCCTCGTTGAGGGCCTCTTCTTCCTCGTCTGTTATCGTCTCTTCCTCTATCAACTCGTCCTCCTCAGATCTCAAACTCACAGCATCATCGTCTTCATCACTTTCATGATCATCATAAACCACAGATCTAGCTATTGACCGTCTGCCCCTAGTACCTCTGCCACCACCACCTCTGCCTCTTCCCCTACCGCGAGATGATCCCACTTTCCTCCTGCCCCTCGATGAAGAGTTATTTCCCCTCTTGGGACTCTCAAAATCAACCTCGGCACTACCTCTCCCCTTTGCCCTCAACTCCCTCCTGGGTCTCAAGCCACGCTCCGGCTCTGATGAAGGCTCCTGCATCCGCAGGGTTTTGGGCGGCCTGCCTCTTTTCCCCCTCATTATATATAAAAGCTATTATTTTCAATTTCAATTTCTGCGTTTATTTAGCCTTCACAGAACCCAGAAAAACGGGTACCGTCAGAAAGCTTGATTTGCGTAGATTCCAAAGTGGTAGTCCCGTAAAGCCCCGGTCTCGGTTTACGTGAGAAAGCTCAAAACCAATGGCTGGCGTCCAGCTTCTGATCGGTCGCAGCCGCCATTTTT

Function

NR:

description
nucleosome-remodeling factor subunit BPTF-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1345280 True 679 TUCP 0.51 1 45529436 45530114

Neighbor

gene id symbol gene type direction distance location
trnas-aga-60 NA coding downstream 2766 45526589 ~ 45526670 (-)
mchr1b LOC106601409 coding downstream 44758 45481000 ~ 45484678 (-)
LOC110486542 LOC106608160 coding downstream 196404 45300733 ~ 45333032 (-)
pik3r6b NA coding downstream 315781 45200981 ~ 45213655 (-)
LOC110485191 LOC106601377 coding downstream 333459 45194711 ~ 45195977 (-)
LOC100135782 LOC106607000 coding upstream 121782 45651896 ~ 45654777 (-)
LOC110486550 LOC106601398 coding upstream 124784 45654898 ~ 45677812 (-)
LOC110486551 fbf1 coding upstream 150744 45680858 ~ 45692892 (-)
LOC110486553 NA coding upstream 173893 45704005 ~ 45709228 (-)
LOC110486554 cygb coding upstream 180035 45710149 ~ 45716653 (-)
G1179318 NA non-coding downstream 73582 45453959 ~ 45455854 (-)
G1179346 NA non-coding downstream 83997 45444241 ~ 45445439 (-)
G1179344 NA non-coding downstream 85860 45443237 ~ 45443576 (-)
G1179209 NA non-coding downstream 176534 45352570 ~ 45352902 (-)
G1179208 NA non-coding downstream 184010 45345215 ~ 45345426 (-)
G1179625 NA non-coding upstream 8154 45538268 ~ 45538793 (-)
G1179630 NA non-coding upstream 17709 45547823 ~ 45548058 (-)
G1179629 NA non-coding upstream 18411 45548525 ~ 45549374 (-)
G1179658 LOC105891918 non-coding upstream 77280 45607394 ~ 45627018 (-)
G1179685 NA non-coding upstream 109776 45639890 ~ 45640411 (-)
zgc:171844 LOC106607059 other downstream 336131 45182660 ~ 45193315 (-)
il-8 il-8 other downstream 442306 45085269 ~ 45087130 (-)
G1178996 NA other downstream 477412 45051576 ~ 45052024 (-)
G1178982 LOC106607046 other downstream 500823 45026515 ~ 45028613 (-)
G1178958 LOC106607010 other downstream 548236 44969210 ~ 44981200 (-)
G1179621 LOC106607015 other upstream 1744 45531858 ~ 45532662 (-)
LOC110486586 ubald2 other upstream 983343 46510585 ~ 46535713 (-)
LOC110486590 LOC105022923 other upstream 1353314 46827752 ~ 46915018 (-)
LOC110486593 LOC106606954 other upstream 1902682 47432406 ~ 47433949 (-)
LOC110486594 LOC106601485 other upstream 1932167 47460436 ~ 47466735 (-)

Expression


Co-expression Network