Gene
RNA
| Item | Value |
|---|---|
| gene id | G1179625 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45538268 ~ 45538793 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nucleosome-remodeling factor subunit BPTF-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1345288 | True | 526 | lncRNA | 0.51 | 1 | 45538268 | 45538793 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnas-aga-60 | NA | coding | downstream | 11598 | 45526589 ~ 45526670 (-) |
| mchr1b | LOC106601409 | coding | downstream | 53590 | 45481000 ~ 45484678 (-) |
| LOC110486542 | LOC106608160 | coding | downstream | 205236 | 45300733 ~ 45333032 (-) |
| pik3r6b | NA | coding | downstream | 324613 | 45200981 ~ 45213655 (-) |
| LOC110485191 | LOC106601377 | coding | downstream | 342291 | 45194711 ~ 45195977 (-) |
| LOC100135782 | LOC106607000 | coding | upstream | 113103 | 45651896 ~ 45654777 (-) |
| LOC110486550 | LOC106601398 | coding | upstream | 116105 | 45654898 ~ 45677812 (-) |
| LOC110486551 | fbf1 | coding | upstream | 142065 | 45680858 ~ 45692892 (-) |
| LOC110486553 | NA | coding | upstream | 165214 | 45704005 ~ 45709228 (-) |
| LOC110486554 | cygb | coding | upstream | 171356 | 45710149 ~ 45716653 (-) |
| G1179318 | NA | non-coding | downstream | 82414 | 45453959 ~ 45455854 (-) |
| G1179346 | NA | non-coding | downstream | 92829 | 45444241 ~ 45445439 (-) |
| G1179344 | NA | non-coding | downstream | 94692 | 45443237 ~ 45443576 (-) |
| G1179209 | NA | non-coding | downstream | 185366 | 45352570 ~ 45352902 (-) |
| G1179208 | NA | non-coding | downstream | 192842 | 45345215 ~ 45345426 (-) |
| G1179630 | NA | non-coding | upstream | 9030 | 45547823 ~ 45548058 (-) |
| G1179629 | NA | non-coding | upstream | 9732 | 45548525 ~ 45549374 (-) |
| G1179658 | LOC105891918 | non-coding | upstream | 68601 | 45607394 ~ 45627018 (-) |
| G1179685 | NA | non-coding | upstream | 101097 | 45639890 ~ 45640411 (-) |
| G1179621 | LOC106607015 | other | downstream | 5606 | 45531858 ~ 45532662 (-) |
| G1179619 | LOC106601391 | other | downstream | 8154 | 45529436 ~ 45530114 (-) |
| zgc:171844 | LOC106607059 | other | downstream | 344963 | 45182660 ~ 45193315 (-) |
| il-8 | il-8 | other | downstream | 451138 | 45085269 ~ 45087130 (-) |
| G1178996 | NA | other | downstream | 486244 | 45051576 ~ 45052024 (-) |
| LOC110486586 | ubald2 | other | upstream | 974664 | 46510585 ~ 46535713 (-) |
| LOC110486590 | LOC105022923 | other | upstream | 1344635 | 46827752 ~ 46915018 (-) |
| LOC110486593 | LOC106606954 | other | upstream | 1894003 | 47432406 ~ 47433949 (-) |
| LOC110486594 | LOC106601485 | other | upstream | 1923488 | 47460436 ~ 47466735 (-) |
| LOC110486618 | LOC106606909 | other | upstream | 2464238 | 47999581 ~ 48015951 (-) |
