Gene
RNA
| Item | Value |
|---|---|
| gene id | G1179629 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45548525 ~ 45549374 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: nucleosome-remodeling factor subunit BPTF-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1345292 | True | 796 | lncRNA | 0.61 | 2 | 45548525 | 45549374 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnas-aga-60 | NA | coding | downstream | 21855 | 45526589 ~ 45526670 (-) |
| mchr1b | LOC106601409 | coding | downstream | 63847 | 45481000 ~ 45484678 (-) |
| LOC110486542 | LOC106608160 | coding | downstream | 215493 | 45300733 ~ 45333032 (-) |
| pik3r6b | NA | coding | downstream | 334870 | 45200981 ~ 45213655 (-) |
| LOC110485191 | LOC106601377 | coding | downstream | 352548 | 45194711 ~ 45195977 (-) |
| LOC100135782 | LOC106607000 | coding | upstream | 102522 | 45651896 ~ 45654777 (-) |
| LOC110486550 | LOC106601398 | coding | upstream | 105524 | 45654898 ~ 45677812 (-) |
| LOC110486551 | fbf1 | coding | upstream | 131484 | 45680858 ~ 45692892 (-) |
| LOC110486553 | NA | coding | upstream | 154633 | 45704005 ~ 45709228 (-) |
| LOC110486554 | cygb | coding | upstream | 160775 | 45710149 ~ 45716653 (-) |
| G1179630 | NA | non-coding | downstream | 467 | 45547823 ~ 45548058 (-) |
| G1179625 | NA | non-coding | downstream | 9732 | 45538268 ~ 45538793 (-) |
| G1179318 | NA | non-coding | downstream | 92671 | 45453959 ~ 45455854 (-) |
| G1179346 | NA | non-coding | downstream | 103086 | 45444241 ~ 45445439 (-) |
| G1179344 | NA | non-coding | downstream | 104949 | 45443237 ~ 45443576 (-) |
| G1179658 | LOC105891918 | non-coding | upstream | 58020 | 45607394 ~ 45627018 (-) |
| G1179685 | NA | non-coding | upstream | 90516 | 45639890 ~ 45640411 (-) |
| G1179692 | NA | non-coding | upstream | 109658 | 45659032 ~ 45659235 (-) |
| G1179693 | NA | non-coding | upstream | 109976 | 45659350 ~ 45661258 (-) |
| G1179621 | LOC106607015 | other | downstream | 15863 | 45531858 ~ 45532662 (-) |
| G1179619 | LOC106601391 | other | downstream | 18411 | 45529436 ~ 45530114 (-) |
| zgc:171844 | LOC106607059 | other | downstream | 355220 | 45182660 ~ 45193315 (-) |
| il-8 | il-8 | other | downstream | 461395 | 45085269 ~ 45087130 (-) |
| G1178996 | NA | other | downstream | 496501 | 45051576 ~ 45052024 (-) |
| LOC110486586 | ubald2 | other | upstream | 964083 | 46510585 ~ 46535713 (-) |
| LOC110486590 | LOC105022923 | other | upstream | 1334054 | 46827752 ~ 46915018 (-) |
| LOC110486593 | LOC106606954 | other | upstream | 1883422 | 47432406 ~ 47433949 (-) |
| LOC110486594 | LOC106601485 | other | upstream | 1912907 | 47460436 ~ 47466735 (-) |
| LOC110486618 | LOC106606909 | other | upstream | 2453657 | 47999581 ~ 48015951 (-) |
