G1179685



Basic Information


Item Value
gene id G1179685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45639890 ~ 45640411 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1345353
TGAAGCTTCGTGATCCGTGTCTGGAGGACGTTGGGAACATCAGGGAGGGCAGCATCTTCAGCCAGCTGCTCCTCAAAGCCAGAGACTGAGTTGTCCACCATATTTATCTGCTTCTCCAAGAACATGGAAGCTGTGGCTCTTTTTGTTGTACAGGTCACAGAGGACGTTGGTGTCGTCAAACTTGTTGTTAAGACCACTCAGTTTGAGGGACAGGGCGGAGGTGGTGGGCCCAAGGGGCTTCTGGGCTAGGATGGGATCCATATCTCTCTGGACCGCTGCCTTCTCTGCCTCCAGGTTCCTAACAGTCAGGGTGGCCCTCTGCAGGGCAAAACACACCATGGATATCACACTCTAGAAACACACTGTCCATTATAATGATGCTATGTAGCA

Function


NR:

description
envoplakin-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1345353 True 390 lncRNA 0.52 2 45639890 45640411

Neighbor


gene id symbol gene type direction distance location
trnas-aga-60 NA coding downstream 113220 45526589 ~ 45526670 (-)
mchr1b LOC106601409 coding downstream 155212 45481000 ~ 45484678 (-)
LOC110486542 LOC106608160 coding downstream 306858 45300733 ~ 45333032 (-)
pik3r6b NA coding downstream 426235 45200981 ~ 45213655 (-)
LOC110485191 LOC106601377 coding downstream 443913 45194711 ~ 45195977 (-)
LOC100135782 LOC106607000 coding upstream 11485 45651896 ~ 45654777 (-)
LOC110486550 LOC106601398 coding upstream 14487 45654898 ~ 45677812 (-)
LOC110486551 fbf1 coding upstream 40447 45680858 ~ 45692892 (-)
LOC110486553 NA coding upstream 63596 45704005 ~ 45709228 (-)
LOC110486554 cygb coding upstream 69738 45710149 ~ 45716653 (-)
G1179658 LOC105891918 non-coding downstream 12872 45607394 ~ 45627018 (-)
G1179629 NA non-coding downstream 90516 45548525 ~ 45549374 (-)
G1179630 NA non-coding downstream 91832 45547823 ~ 45548058 (-)
G1179625 NA non-coding downstream 101097 45538268 ~ 45538793 (-)
G1179318 NA non-coding downstream 184036 45453959 ~ 45455854 (-)
G1179692 NA non-coding upstream 18621 45659032 ~ 45659235 (-)
G1179693 NA non-coding upstream 18939 45659350 ~ 45661258 (-)
G1179695 NA non-coding upstream 20909 45661320 ~ 45661620 (-)
G1179700 NA non-coding upstream 28614 45669025 ~ 45669290 (-)
G1179621 LOC106607015 other downstream 107228 45531858 ~ 45532662 (-)
G1179619 LOC106601391 other downstream 109776 45529436 ~ 45530114 (-)
zgc:171844 LOC106607059 other downstream 446585 45182660 ~ 45193315 (-)
il-8 il-8 other downstream 552760 45085269 ~ 45087130 (-)
G1178996 NA other downstream 587866 45051576 ~ 45052024 (-)
LOC110486586 ubald2 other upstream 873046 46510585 ~ 46535713 (-)
LOC110486590 LOC105022923 other upstream 1243017 46827752 ~ 46915018 (-)
LOC110486593 LOC106606954 other upstream 1792385 47432406 ~ 47433949 (-)
LOC110486594 LOC106601485 other upstream 1821870 47460436 ~ 47466735 (-)
LOC110486618 LOC106606909 other upstream 2362620 47999581 ~ 48015951 (-)

Expression



Co-expression Network