G1179693



Basic Information


Item Value
gene id G1179693
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45659350 ~ 45661258 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1345363
CTAGCCACATCCCTTACCCTAGCCACAACCCTTACCCTATCcacaacccttaccctagtttcatgtccacaccccagtTCAACACTAACCCCGTTATCTTACAGTCAGACAGTGAAGATGGTTATGTTTAAAGTAccgtaactgtccagtgtttccagatctctatgaaatatgacctataattaattacaatatgagttAAATAGTGTTCcttccaacaacaaaaaaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1345363 True 230 lncRNA 0.40 2 45659350 45661258

Neighbor


gene id symbol gene type direction distance location
LOC100135782 LOC106607000 coding downstream 4573 45651896 ~ 45654777 (-)
trnas-aga-60 NA coding downstream 132680 45526589 ~ 45526670 (-)
mchr1b LOC106601409 coding downstream 174672 45481000 ~ 45484678 (-)
LOC110486542 LOC106608160 coding downstream 326318 45300733 ~ 45333032 (-)
pik3r6b NA coding downstream 445695 45200981 ~ 45213655 (-)
LOC110486551 fbf1 coding upstream 19600 45680858 ~ 45692892 (-)
LOC110486553 NA coding upstream 42749 45704005 ~ 45709228 (-)
LOC110486554 cygb coding upstream 48891 45710149 ~ 45716653 (-)
LOC110486556 LOC106601411 coding upstream 83695 45744953 ~ 45747109 (-)
LOC110486561 LOC106601408 coding upstream 306806 45968064 ~ 45977403 (-)
G1179692 NA non-coding downstream 115 45659032 ~ 45659235 (-)
LOC110486550 LOC106601398 non-coding downstream 2805 45654898 ~ 45677812 (-)
G1179685 NA non-coding downstream 18939 45639890 ~ 45640411 (-)
G1179658 LOC105891918 non-coding downstream 32332 45607394 ~ 45627018 (-)
G1179629 NA non-coding downstream 109976 45548525 ~ 45549374 (-)
G1179695 NA non-coding upstream 62 45661320 ~ 45661620 (-)
G1179700 NA non-coding upstream 7767 45669025 ~ 45669290 (-)
G1179761 NA non-coding upstream 140645 45801903 ~ 45802188 (-)
G1179779 NA non-coding upstream 168034 45829292 ~ 45829928 (-)
G1179621 LOC106607015 other downstream 126688 45531858 ~ 45532662 (-)
G1179619 LOC106601391 other downstream 129236 45529436 ~ 45530114 (-)
zgc:171844 LOC106607059 other downstream 466045 45182660 ~ 45193315 (-)
il-8 il-8 other downstream 572220 45085269 ~ 45087130 (-)
G1178996 NA other downstream 607326 45051576 ~ 45052024 (-)
LOC110486586 ubald2 other upstream 852199 46510585 ~ 46535713 (-)
LOC110486590 LOC105022923 other upstream 1222170 46827752 ~ 46915018 (-)
LOC110486593 LOC106606954 other upstream 1771538 47432406 ~ 47433949 (-)
LOC110486594 LOC106601485 other upstream 1801023 47460436 ~ 47466735 (-)
LOC110486618 LOC106606909 other upstream 2341773 47999581 ~ 48015951 (-)

Expression



Co-expression Network