Gene
RNA
| Item | Value |
|---|---|
| gene id | G1179448 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45662862 ~ 45663122 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1345091 | True | 261 | lncRNA | 0.41 | 1 | 45662862 | 45663122 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486549 | LOC106607014 | coding | upstream | 16013 | 45632656 ~ 45646849 (+) |
| LOC110486548 | LOC106607064 | coding | upstream | 35842 | 45621533 ~ 45627020 (+) |
| LOC110486546 | LOC106601396 | coding | upstream | 48243 | 45559934 ~ 45614619 (+) |
| LOC110486547 | LOC106607066 | coding | upstream | 103261 | 45555818 ~ 45559601 (+) |
| LOC110485192 | LOC106601391 | coding | upstream | 108759 | 45529398 ~ 45554103 (+) |
| LOC110486552 | NA | coding | downstream | 15716 | 45678838 ~ 45681070 (+) |
| LOC118938602 | NA | coding | downstream | 16408 | 45679530 ~ 45679601 (+) |
| LOC118938601 | NA | coding | downstream | 16970 | 45680092 ~ 45680163 (+) |
| LOC118938603 | NA | coding | downstream | 17202 | 45680324 ~ 45680396 (+) |
| LOC110486555 | LOC106606986 | coding | downstream | 67345 | 45730467 ~ 45742507 (+) |
| G1179445 | NA | non-coding | upstream | 6823 | 45655027 ~ 45656039 (+) |
| G1179446 | NA | non-coding | upstream | 8366 | 45653767 ~ 45654496 (+) |
| G1179402 | NA | non-coding | upstream | 129912 | 45532718 ~ 45532950 (+) |
| G1179369 | NA | non-coding | upstream | 191447 | 45471185 ~ 45471415 (+) |
| G1179360 | NA | non-coding | upstream | 200557 | 45462053 ~ 45462305 (+) |
| G1179452 | NA | non-coding | downstream | 6438 | 45669560 ~ 45669987 (+) |
| G1179453 | NA | non-coding | downstream | 7541 | 45670663 ~ 45670951 (+) |
| G1179465 | fbf1 | non-coding | downstream | 27374 | 45690496 ~ 45690869 (+) |
| G1179879 | LOC106601408 | non-coding | downstream | 304948 | 45968070 ~ 45970177 (+) |
| G1179362 | NA | other | upstream | 199919 | 45462588 ~ 45462943 (+) |
| G1179156 | NA | other | upstream | 349829 | 45312330 ~ 45313033 (+) |
| LOC110486526 | smarca4 | other | upstream | 693143 | 44967368 ~ 44996127 (+) |
| LOC110485188 | LOC106601310 | other | upstream | 736545 | 44878675 ~ 44943951 (+) |
| LOC118936304 | LOC106601427 | other | downstream | 510906 | 46173911 ~ 46176562 (+) |
| G1180047 | NA | other | downstream | 576022 | 46239144 ~ 46273601 (+) |
| LOC110485193 | LOC106601421 | other | downstream | 668596 | 46302751 ~ 46336386 (+) |
| G1181472 | NA | other | downstream | 1711041 | 47374163 ~ 47374477 (+) |
| tmem100a | LOC106606948 | other | downstream | 1804994 | 47468012 ~ 47471205 (+) |
