Gene
RNA
| Item | Value |
|---|---|
| gene id | G1179700 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45669025 ~ 45669290 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1345370 | True | 266 | lncRNA | 0.45 | 1 | 45669025 | 45669290 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100135782 | LOC106607000 | coding | downstream | 14248 | 45651896 ~ 45654777 (-) |
| trnas-aga-60 | NA | coding | downstream | 142355 | 45526589 ~ 45526670 (-) |
| mchr1b | LOC106601409 | coding | downstream | 184347 | 45481000 ~ 45484678 (-) |
| LOC110486542 | LOC106608160 | coding | downstream | 335993 | 45300733 ~ 45333032 (-) |
| pik3r6b | NA | coding | downstream | 455370 | 45200981 ~ 45213655 (-) |
| LOC110486551 | fbf1 | coding | upstream | 11568 | 45680858 ~ 45692892 (-) |
| LOC110486553 | NA | coding | upstream | 34717 | 45704005 ~ 45709228 (-) |
| LOC110486554 | cygb | coding | upstream | 40859 | 45710149 ~ 45716653 (-) |
| LOC110486556 | LOC106601411 | coding | upstream | 75663 | 45744953 ~ 45747109 (-) |
| LOC110486561 | LOC106601408 | coding | upstream | 298774 | 45968064 ~ 45977403 (-) |
| G1179695 | NA | non-coding | downstream | 7405 | 45661320 ~ 45661620 (-) |
| G1179693 | NA | non-coding | downstream | 7767 | 45659350 ~ 45661258 (-) |
| G1179692 | NA | non-coding | downstream | 9790 | 45659032 ~ 45659235 (-) |
| LOC110486550 | LOC106601398 | non-coding | downstream | 12480 | 45654898 ~ 45677812 (-) |
| G1179685 | NA | non-coding | downstream | 28614 | 45639890 ~ 45640411 (-) |
| G1179761 | NA | non-coding | upstream | 132613 | 45801903 ~ 45802188 (-) |
| G1179779 | NA | non-coding | upstream | 160002 | 45829292 ~ 45829928 (-) |
| G1179830 | NA | non-coding | upstream | 231760 | 45901050 ~ 45901314 (-) |
| G1179842 | NA | non-coding | upstream | 237083 | 45906373 ~ 45906656 (-) |
| G1179621 | LOC106607015 | other | downstream | 136363 | 45531858 ~ 45532662 (-) |
| G1179619 | LOC106601391 | other | downstream | 138911 | 45529436 ~ 45530114 (-) |
| zgc:171844 | LOC106607059 | other | downstream | 475720 | 45182660 ~ 45193315 (-) |
| il-8 | il-8 | other | downstream | 581895 | 45085269 ~ 45087130 (-) |
| G1178996 | NA | other | downstream | 617001 | 45051576 ~ 45052024 (-) |
| LOC110486586 | ubald2 | other | upstream | 844167 | 46510585 ~ 46535713 (-) |
| LOC110486590 | LOC105022923 | other | upstream | 1214138 | 46827752 ~ 46915018 (-) |
| LOC110486593 | LOC106606954 | other | upstream | 1763506 | 47432406 ~ 47433949 (-) |
| LOC110486594 | LOC106601485 | other | upstream | 1792991 | 47460436 ~ 47466735 (-) |
| LOC110486618 | LOC106606909 | other | upstream | 2333741 | 47999581 ~ 48015951 (-) |
