Gene
RNA
| Item | Value |
|---|---|
| gene id | G1179830 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45901050 ~ 45901314 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1345508 | True | 265 | lncRNA | 0.35 | 1 | 45901050 | 45901314 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486556 | LOC106601411 | coding | downstream | 153941 | 45744953 ~ 45747109 (-) |
| LOC110486554 | cygb | coding | downstream | 184397 | 45710149 ~ 45716653 (-) |
| LOC110486553 | NA | coding | downstream | 191822 | 45704005 ~ 45709228 (-) |
| LOC110486551 | fbf1 | coding | downstream | 208158 | 45680858 ~ 45692892 (-) |
| LOC110486550 | LOC106601398 | coding | downstream | 223238 | 45654898 ~ 45677812 (-) |
| LOC110486561 | LOC106601408 | coding | upstream | 66750 | 45968064 ~ 45977403 (-) |
| LOC110486567 | LOC106606966 | coding | upstream | 299712 | 46201026 ~ 46211745 (-) |
| recql5 | LOC106601412 | coding | upstream | 310864 | 46212178 ~ 46228955 (-) |
| LOC110486569 | LOC106601418 | coding | upstream | 329070 | 46230384 ~ 46235927 (-) |
| LOC118938311 | LOC106601426 | coding | upstream | 344151 | 46245465 ~ 46254192 (-) |
| G1179779 | NA | non-coding | downstream | 71122 | 45829292 ~ 45829928 (-) |
| G1179761 | NA | non-coding | downstream | 98862 | 45801903 ~ 45802188 (-) |
| G1179700 | NA | non-coding | downstream | 231760 | 45669025 ~ 45669290 (-) |
| G1179695 | NA | non-coding | downstream | 239430 | 45661320 ~ 45661620 (-) |
| G1179842 | NA | non-coding | upstream | 5059 | 45906373 ~ 45906656 (-) |
| G1179843 | NA | non-coding | upstream | 5365 | 45906679 ~ 45906902 (-) |
| G1180280 | NA | non-coding | upstream | 10816 | 45912130 ~ 45922166 (-) |
| G1180396 | LOC106601427 | non-coding | upstream | 273387 | 46174701 ~ 46176563 (-) |
| G1180309 | LOC106601422 | non-coding | upstream | 278646 | 46179960 ~ 46183368 (-) |
| G1179621 | LOC106607015 | other | downstream | 368388 | 45531858 ~ 45532662 (-) |
| G1179619 | LOC106601391 | other | downstream | 370936 | 45529436 ~ 45530114 (-) |
| zgc:171844 | LOC106607059 | other | downstream | 707745 | 45182660 ~ 45193315 (-) |
| il-8 | il-8 | other | downstream | 813920 | 45085269 ~ 45087130 (-) |
| G1178996 | NA | other | downstream | 849026 | 45051576 ~ 45052024 (-) |
| LOC110486586 | ubald2 | other | upstream | 612143 | 46510585 ~ 46535713 (-) |
| LOC110486590 | LOC105022923 | other | upstream | 982114 | 46827752 ~ 46915018 (-) |
| LOC110486593 | LOC106606954 | other | upstream | 1531482 | 47432406 ~ 47433949 (-) |
| LOC110486594 | LOC106601485 | other | upstream | 1560967 | 47460436 ~ 47466735 (-) |
| LOC110486618 | LOC106606909 | other | upstream | 2101717 | 47999581 ~ 48015951 (-) |
