G1180047


Basic Information

Item Value
gene id G1180047
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 46239144 ~ 46273601 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1345745
cactccagccacatgaggtctagcattgtcttgcattagcaggaacccagggccaaccgcaccagcatatggtctcacaaggagtctgaggatctcatctcggtacctaatggcagtcaggctacctctggcgagcacatggagggctgtgcggccccccaaagaaatgccacaccacaccatgactgacccactgccaaaccggtcatgctggaggatgttgcaggcagcagaacgttctccacggcgtctccagactctgtcacgtctgtcacatgtgctcagtgtgaacctgctttcatctgtgaagagcacagggcgccagtggcgaatttgccaatcttggtgttctctggcaaatgccaaacgtcctgcacggtgttgagctgtaagcacaacccccacctgtggacgtcgggccctcataccaccctcatggagtctgtttctgaccgtttgagcagacacatgcacatttgtggcctgctggaggtcgttttgcagggctctggcagtgctcctcctgctcctccttgc

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1345745 True 537 TUCP 0.56 2 46239144 46273601

Neighbor

gene id symbol gene type direction distance location
LOC110486571 nupl coding upstream 8761 46228993 ~ 46230383 (+)
LOC110486572 LOC106601412 coding upstream 13387 46219879 ~ 46226688 (+)
LOC110486565 LOC106606967 coding upstream 39028 46184406 ~ 46200116 (+)
LOC100136054 LOC106601422 coding upstream 55764 46179912 ~ 46183380 (+)
LOC118936304 LOC106601427 coding upstream 62586 46173911 ~ 46176562 (+)
LOC110486574 LOC106606976 coding downstream 723 46274324 ~ 46294468 (+)
LOC110485193 LOC106601421 coding downstream 29150 46302751 ~ 46336386 (+)
mettl23 mettl23 coding downstream 209535 46483136 ~ 46485100 (+)
LOC110486580 mfs11 coding downstream 214499 46488100 ~ 46493732 (+)
LOC110486584 LOC106606957 coding downstream 220345 46493946 ~ 46509241 (+)
G1180008 LOC106601418 non-coding upstream 4083 46230385 ~ 46235061 (+)
G1180010 LOC106601417 non-coding upstream 36840 46200500 ~ 46202304 (+)
LOC110486562 peca1 non-coding upstream 103620 46130578 ~ 46138965 (+)
G1179970 NA non-coding upstream 121547 46117131 ~ 46117597 (+)
G1180070 NA non-coding downstream 23179 46296780 ~ 46297068 (+)
G1180071 NA non-coding downstream 24610 46298211 ~ 46298451 (+)
G1180093 NA non-coding downstream 73959 46347560 ~ 46348851 (+)
G1180133 NA non-coding downstream 116878 46390479 ~ 46442094 (+)
G1180161 NA non-coding downstream 153319 46426920 ~ 46431222 (+)
LOC110485192 LOC106601391 other upstream 709016 45529398 ~ 45554103 (+)
G1179362 NA other upstream 776201 45462588 ~ 45462943 (+)
G1179156 NA other upstream 926111 45312330 ~ 45313033 (+)
LOC110486526 smarca4 other upstream 1269425 44967368 ~ 44996127 (+)
G1181472 NA other downstream 1100562 47374163 ~ 47374477 (+)
tmem100a LOC106606948 other downstream 1194515 47468012 ~ 47471205 (+)
G1181636 NA other downstream 1275678 47549279 ~ 47549548 (+)
G1181955 NA other downstream 1468760 47742361 ~ 47743064 (+)

Expression


Co-expression Network