Gene
RNA
| Item | Value |
|---|---|
| gene id | G1180071 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 46298211 ~ 46298451 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1345769 | True | 241 | lncRNA | 0.40 | 1 | 46298211 | 46298451 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486574 | LOC106606976 | coding | upstream | 3743 | 46274324 ~ 46294468 (+) |
| LOC110486573 | LOC106601414 | coding | upstream | 25841 | 46257363 ~ 46272370 (+) |
| LOC110486571 | nupl | coding | upstream | 67828 | 46228993 ~ 46230383 (+) |
| LOC110486572 | LOC106601412 | coding | upstream | 72454 | 46219879 ~ 46226688 (+) |
| LOC110486565 | LOC106606967 | coding | upstream | 98095 | 46184406 ~ 46200116 (+) |
| LOC110485193 | LOC106601421 | coding | downstream | 4300 | 46302751 ~ 46336386 (+) |
| mettl23 | mettl23 | coding | downstream | 184685 | 46483136 ~ 46485100 (+) |
| LOC110486580 | mfs11 | coding | downstream | 189649 | 46488100 ~ 46493732 (+) |
| LOC110486584 | LOC106606957 | coding | downstream | 195495 | 46493946 ~ 46509241 (+) |
| foxj1a | LOC106601528 | coding | downstream | 243741 | 46542192 ~ 46547913 (+) |
| G1180070 | NA | non-coding | upstream | 1143 | 46296780 ~ 46297068 (+) |
| G1180058 | NA | non-coding | upstream | 30286 | 46267530 ~ 46267925 (+) |
| G1180008 | LOC106601418 | non-coding | upstream | 63150 | 46230385 ~ 46235061 (+) |
| G1180010 | LOC106601417 | non-coding | upstream | 95907 | 46200500 ~ 46202304 (+) |
| G1180093 | NA | non-coding | downstream | 49109 | 46347560 ~ 46348851 (+) |
| G1180133 | NA | non-coding | downstream | 92028 | 46390479 ~ 46442094 (+) |
| G1180161 | NA | non-coding | downstream | 128469 | 46426920 ~ 46431222 (+) |
| G1180193 | NA | non-coding | downstream | 173467 | 46471918 ~ 46476079 (+) |
| G1180200 | NA | non-coding | downstream | 199019 | 46497470 ~ 46497708 (+) |
| G1180047 | NA | other | upstream | 24610 | 46239144 ~ 46273601 (+) |
| LOC118936304 | LOC106601427 | other | upstream | 121649 | 46173911 ~ 46176562 (+) |
| LOC110485192 | LOC106601391 | other | upstream | 768083 | 45529398 ~ 45554103 (+) |
| G1179362 | NA | other | upstream | 835268 | 45462588 ~ 45462943 (+) |
| G1179156 | NA | other | upstream | 985178 | 45312330 ~ 45313033 (+) |
| G1181472 | NA | other | downstream | 1075712 | 47374163 ~ 47374477 (+) |
| tmem100a | LOC106606948 | other | downstream | 1169665 | 47468012 ~ 47471205 (+) |
| G1181636 | NA | other | downstream | 1250828 | 47549279 ~ 47549548 (+) |
| G1181955 | NA | other | downstream | 1443910 | 47742361 ~ 47743064 (+) |
