Gene
RNA
| Item | Value |
|---|---|
| gene id | G1180610 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 46519406 ~ 46522622 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1346419 | True | 424 | lncRNA | 0.33 | 3 | 46519406 | 46522622 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486583 | srsf2 | coding | downstream | 31524 | 46484771 ~ 46487882 (-) |
| LOC110486581 | jmjd6 | coding | downstream | 36543 | 46472494 ~ 46482863 (-) |
| LOC110486579 | NA | coding | downstream | 51063 | 46440996 ~ 46468343 (-) |
| LOC110486578 | st6galnac2 | coding | downstream | 91140 | 46422708 ~ 46428266 (-) |
| LOC110486575 | LOC106596896 | coding | downstream | 97025 | 46336544 ~ 46422381 (-) |
| LOC118938312 | NA | coding | upstream | 31330 | 46553952 ~ 46561085 (-) |
| LOC110486590 | LOC105022923 | coding | upstream | 305130 | 46827752 ~ 46915018 (-) |
| LOC110485195 | LOC102192139 | coding | upstream | 406881 | 46929363 ~ 47345934 (-) |
| LOC110486593 | LOC106606954 | coding | upstream | 909784 | 47432406 ~ 47433949 (-) |
| LOC110486594 | LOC106601485 | coding | upstream | 937814 | 47460436 ~ 47466735 (-) |
| G1180607 | NA | non-coding | downstream | 9162 | 46508200 ~ 46510244 (-) |
| G1180606 | NA | non-coding | downstream | 11369 | 46507246 ~ 46508037 (-) |
| G1180605 | NA | non-coding | downstream | 12897 | 46506077 ~ 46506509 (-) |
| G1180603 | NA | non-coding | downstream | 15102 | 46504088 ~ 46504304 (-) |
| G1180602 | NA | non-coding | downstream | 15335 | 46503564 ~ 46504071 (-) |
| G1180621 | NA | non-coding | upstream | 19592 | 46542214 ~ 46542414 (-) |
| G1180622 | LOC106606962 | non-coding | upstream | 20498 | 46543120 ~ 46544068 (-) |
| G1180645 | NA | non-coding | upstream | 59140 | 46581762 ~ 46600079 (-) |
| G1180729 | NA | non-coding | upstream | 154938 | 46677560 ~ 46744083 (-) |
| G1181081 | NA | non-coding | upstream | 287802 | 46810424 ~ 46906931 (-) |
| G1179621 | LOC106607015 | other | downstream | 986744 | 45531858 ~ 45532662 (-) |
| G1179619 | LOC106601391 | other | downstream | 989292 | 45529436 ~ 45530114 (-) |
| zgc:171844 | LOC106607059 | other | downstream | 1326101 | 45182660 ~ 45193315 (-) |
| il-8 | il-8 | other | downstream | 1432276 | 45085269 ~ 45087130 (-) |
| G1178996 | NA | other | downstream | 1467382 | 45051576 ~ 45052024 (-) |
| LOC110486618 | LOC106606909 | other | upstream | 1480409 | 47999581 ~ 48015951 (-) |
| G1183013 | NA | other | upstream | 1502479 | 48025101 ~ 48025776 (-) |
