G1180211


Basic Information

Item Value
gene id G1180211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 46538779 ~ 46539131 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1345957
attctacccgttactcagtacttcgttgaagcacctttggcaacgattacagcatcgagtcttcttaggttaaacgctacaagcttggcacatctgtatttggggagtttctcccattcttctctgaagatcctgtcaagctctgtcaggttggatggggagcaatgctgcacagctattttcaggtctctccagaaatgtttgatcgggttcaagtccgggctttggctgggccactcaaggacattcagagatttgtcctgaagccactcctgtgttgtcttggctgtgtgcttagggagtaggttttcatcaaggatctctctgtactttgctccattcatctttgcctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1345957 True 353 lncRNA 0.47 1 46538779 46539131

Neighbor

gene id symbol gene type direction distance location
LOC110486584 LOC106606957 coding upstream 29538 46493946 ~ 46509241 (+)
LOC110486580 mfs11 coding upstream 45047 46488100 ~ 46493732 (+)
mettl23 mettl23 coding upstream 53679 46483136 ~ 46485100 (+)
LOC110485193 LOC106601421 coding upstream 202393 46302751 ~ 46336386 (+)
LOC110486574 LOC106606976 coding upstream 244311 46274324 ~ 46294468 (+)
foxj1a LOC106601528 coding downstream 3061 46542192 ~ 46547913 (+)
LOC110486588 LOC106602603 coding downstream 20677 46559808 ~ 46565672 (+)
LOC110486589 LOC106606959 coding downstream 32111 46571242 ~ 46672347 (+)
LOC118938555 NA coding downstream 276876 46816007 ~ 46816999 (+)
LOC118938083 NA coding downstream 279407 46818538 ~ 46822978 (+)
G1180210 NA non-coding upstream 94 46538308 ~ 46538685 (+)
G1180205 NA non-coding upstream 13511 46524198 ~ 46525268 (+)
G1180200 NA non-coding upstream 41071 46497470 ~ 46497708 (+)
G1180193 NA non-coding upstream 62700 46471918 ~ 46476079 (+)
G1180133 NA non-coding upstream 96685 46390479 ~ 46442094 (+)
G1180716 NA non-coding downstream 139003 46678134 ~ 46713117 (+)
G1180743 NA non-coding downstream 208135 46747266 ~ 46754851 (+)
G1180758 NA non-coding downstream 222601 46761732 ~ 46813138 (+)
G1180776 NA non-coding downstream 271293 46810424 ~ 46827683 (+)
G1180047 NA other upstream 265178 46239144 ~ 46273601 (+)
LOC118936304 LOC106601427 other upstream 362217 46173911 ~ 46176562 (+)
LOC110485192 LOC106601391 other upstream 1008651 45529398 ~ 45554103 (+)
G1179362 NA other upstream 1075836 45462588 ~ 45462943 (+)
G1181472 NA other downstream 835032 47374163 ~ 47374477 (+)
tmem100a LOC106606948 other downstream 928985 47468012 ~ 47471205 (+)
G1181636 NA other downstream 1010148 47549279 ~ 47549548 (+)
G1181955 NA other downstream 1203230 47742361 ~ 47743064 (+)
G1182153 NA other downstream 1580482 48119613 ~ 48122575 (+)

Expression


Co-expression Network