Gene
RNA
| Item | Value |
|---|---|
| gene id | G1180645 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 46581762 ~ 46600079 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: transmembrane protein 104-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1346462 | False | 586 | lncRNA | 0.41 | 2 | 46581762 | 46582915 |
| TU1346463 | True | 332 | lncRNA | 0.45 | 3 | 46581762 | 46600079 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938312 | NA | coding | downstream | 20677 | 46553952 ~ 46561085 (-) |
| LOC110486586 | ubald2 | coding | downstream | 46049 | 46510585 ~ 46535713 (-) |
| LOC110486583 | srsf2 | coding | downstream | 93880 | 46484771 ~ 46487882 (-) |
| LOC110486581 | jmjd6 | coding | downstream | 98899 | 46472494 ~ 46482863 (-) |
| LOC110486579 | NA | coding | downstream | 113419 | 46440996 ~ 46468343 (-) |
| LOC110486590 | LOC105022923 | coding | upstream | 227673 | 46827752 ~ 46915018 (-) |
| LOC110485195 | LOC102192139 | coding | upstream | 329424 | 46929363 ~ 47345934 (-) |
| LOC110486593 | LOC106606954 | coding | upstream | 832327 | 47432406 ~ 47433949 (-) |
| LOC110486594 | LOC106601485 | coding | upstream | 860357 | 47460436 ~ 47466735 (-) |
| LOC110486596 | LOC106606950 | coding | upstream | 908845 | 47508924 ~ 47522717 (-) |
| G1180622 | LOC106606962 | non-coding | downstream | 37694 | 46543120 ~ 46544068 (-) |
| G1180621 | NA | non-coding | downstream | 39348 | 46542214 ~ 46542414 (-) |
| G1180610 | NA | non-coding | downstream | 59140 | 46519406 ~ 46522622 (-) |
| G1180611 | NA | non-coding | downstream | 60457 | 46519703 ~ 46521305 (-) |
| G1180607 | NA | non-coding | downstream | 71518 | 46508200 ~ 46510244 (-) |
| G1180729 | NA | non-coding | upstream | 77481 | 46677560 ~ 46744083 (-) |
| G1181081 | NA | non-coding | upstream | 210345 | 46810424 ~ 46906931 (-) |
| G1181243 | NA | non-coding | upstream | 478555 | 47078634 ~ 47078983 (-) |
| G1181305 | NA | non-coding | upstream | 564463 | 47164542 ~ 47165117 (-) |
| G1179621 | LOC106607015 | other | downstream | 1049100 | 45531858 ~ 45532662 (-) |
| G1179619 | LOC106601391 | other | downstream | 1051648 | 45529436 ~ 45530114 (-) |
| zgc:171844 | LOC106607059 | other | downstream | 1388457 | 45182660 ~ 45193315 (-) |
| il-8 | il-8 | other | downstream | 1494632 | 45085269 ~ 45087130 (-) |
| LOC110486618 | LOC106606909 | other | upstream | 1402952 | 47999581 ~ 48015951 (-) |
| G1183013 | NA | other | upstream | 1425022 | 48025101 ~ 48025776 (-) |
