Gene
RNA
| Item | Value |
|---|---|
| gene id | G1180716 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 46678134 ~ 46713117 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1346534 | True | 384 | lncRNA | 0.42 | 2 | 46678134 | 46713117 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486589 | LOC106606959 | coding | upstream | 5787 | 46571242 ~ 46672347 (+) |
| LOC110486588 | LOC106602603 | coding | upstream | 112462 | 46559808 ~ 46565672 (+) |
| foxj1a | LOC106601528 | coding | upstream | 130221 | 46542192 ~ 46547913 (+) |
| LOC110486584 | LOC106606957 | coding | upstream | 168893 | 46493946 ~ 46509241 (+) |
| LOC110486580 | mfs11 | coding | upstream | 184402 | 46488100 ~ 46493732 (+) |
| LOC118938555 | NA | coding | downstream | 102890 | 46816007 ~ 46816999 (+) |
| LOC118938083 | NA | coding | downstream | 105421 | 46818538 ~ 46822978 (+) |
| LOC110486591 | LOC106606947 | coding | downstream | 682213 | 47395330 ~ 47400760 (+) |
| LOC110486592 | LOC106606958 | coding | downstream | 690657 | 47403774 ~ 47410322 (+) |
| tmem100a | LOC106606948 | coding | downstream | 754895 | 47468012 ~ 47471205 (+) |
| G1180211 | NA | non-coding | upstream | 139003 | 46538779 ~ 46539131 (+) |
| G1180210 | NA | non-coding | upstream | 139449 | 46538308 ~ 46538685 (+) |
| G1180205 | NA | non-coding | upstream | 152866 | 46524198 ~ 46525268 (+) |
| G1180200 | NA | non-coding | upstream | 180426 | 46497470 ~ 46497708 (+) |
| G1180743 | NA | non-coding | downstream | 34149 | 46747266 ~ 46754851 (+) |
| G1180758 | NA | non-coding | downstream | 48615 | 46761732 ~ 46813138 (+) |
| G1180776 | NA | non-coding | downstream | 97307 | 46810424 ~ 46827683 (+) |
| G1180779 | NA | non-coding | downstream | 102718 | 46815835 ~ 46819263 (+) |
| G1180844 | NA | non-coding | downstream | 215065 | 46928182 ~ 46928398 (+) |
| LOC110485193 | LOC106601421 | other | upstream | 341856 | 46302751 ~ 46336386 (+) |
| G1180047 | NA | other | upstream | 404533 | 46239144 ~ 46273601 (+) |
| LOC118936304 | LOC106601427 | other | upstream | 501572 | 46173911 ~ 46176562 (+) |
| LOC110485192 | LOC106601391 | other | upstream | 1148006 | 45529398 ~ 45554103 (+) |
| G1179362 | NA | other | upstream | 1215191 | 45462588 ~ 45462943 (+) |
| G1181472 | NA | other | downstream | 661046 | 47374163 ~ 47374477 (+) |
| G1181636 | NA | other | downstream | 836162 | 47549279 ~ 47549548 (+) |
| G1181955 | NA | other | downstream | 1029244 | 47742361 ~ 47743064 (+) |
| G1182153 | NA | other | downstream | 1406496 | 48119613 ~ 48122575 (+) |
