G1180758


Basic Information

Item Value
gene id G1180758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 46761732 ~ 46813138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1346578
TAAGAGACATActcatcaccctgaacacaccatctccactgtcaaacatggtagtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactggaaaggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1346578 True 252 lncRNA 0.43 2 46761732 46813138

Neighbor

gene id symbol gene type direction distance location
LOC110486589 LOC106606959 coding upstream 89385 46571242 ~ 46672347 (+)
LOC110486588 LOC106602603 coding upstream 196060 46559808 ~ 46565672 (+)
foxj1a LOC106601528 coding upstream 213819 46542192 ~ 46547913 (+)
LOC110486584 LOC106606957 coding upstream 252491 46493946 ~ 46509241 (+)
LOC110486580 mfs11 coding upstream 268000 46488100 ~ 46493732 (+)
LOC118938555 NA coding downstream 2869 46816007 ~ 46816999 (+)
LOC118938083 NA coding downstream 5400 46818538 ~ 46822978 (+)
LOC110486591 LOC106606947 coding downstream 582192 47395330 ~ 47400760 (+)
LOC110486592 LOC106606958 coding downstream 590636 47403774 ~ 47410322 (+)
tmem100a LOC106606948 coding downstream 654874 47468012 ~ 47471205 (+)
G1180743 NA non-coding upstream 6881 46747266 ~ 46754851 (+)
G1180716 NA non-coding upstream 48615 46678134 ~ 46713117 (+)
G1180211 NA non-coding upstream 222601 46538779 ~ 46539131 (+)
G1180210 NA non-coding upstream 223047 46538308 ~ 46538685 (+)
G1180779 NA non-coding downstream 2697 46815835 ~ 46819263 (+)
G1180844 NA non-coding downstream 115044 46928182 ~ 46928398 (+)
G1180845 NA non-coding downstream 116386 46929524 ~ 46932162 (+)
G1181474 NA non-coding downstream 561637 47374775 ~ 47375077 (+)
G1181480 NA non-coding downstream 566662 47379800 ~ 47380035 (+)
LOC110485193 LOC106601421 other upstream 425454 46302751 ~ 46336386 (+)
G1180047 NA other upstream 488131 46239144 ~ 46273601 (+)
LOC118936304 LOC106601427 other upstream 585170 46173911 ~ 46176562 (+)
LOC110485192 LOC106601391 other upstream 1231604 45529398 ~ 45554103 (+)
G1179362 NA other upstream 1298789 45462588 ~ 45462943 (+)
G1181472 NA other downstream 561025 47374163 ~ 47374477 (+)
G1181636 NA other downstream 736141 47549279 ~ 47549548 (+)
G1181955 NA other downstream 929223 47742361 ~ 47743064 (+)
G1182153 NA other downstream 1306475 48119613 ~ 48122575 (+)

Expression


Co-expression Network