Gene
RNA
| Item | Value |
|---|---|
| gene id | G1180844 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 46928182 ~ 46928398 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1346673 | True | 217 | lncRNA | 0.40 | 1 | 46928182 | 46928398 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938083 | NA | coding | upstream | 105204 | 46818538 ~ 46822978 (+) |
| LOC118938555 | NA | coding | upstream | 111183 | 46816007 ~ 46816999 (+) |
| LOC110486589 | LOC106606959 | coding | upstream | 255835 | 46571242 ~ 46672347 (+) |
| LOC110486588 | LOC106602603 | coding | upstream | 362510 | 46559808 ~ 46565672 (+) |
| foxj1a | LOC106601528 | coding | upstream | 380269 | 46542192 ~ 46547913 (+) |
| LOC110486591 | LOC106606947 | coding | downstream | 466932 | 47395330 ~ 47400760 (+) |
| LOC110486592 | LOC106606958 | coding | downstream | 475376 | 47403774 ~ 47410322 (+) |
| tmem100a | LOC106606948 | coding | downstream | 539614 | 47468012 ~ 47471205 (+) |
| LOC110486595 | paqrb | coding | downstream | 553840 | 47482238 ~ 47505989 (+) |
| LOC110486605 | tmem220 | coding | downstream | 902523 | 47830848 ~ 47832931 (+) |
| G1180776 | NA | non-coding | upstream | 100499 | 46810424 ~ 46827683 (+) |
| G1180779 | NA | non-coding | upstream | 108919 | 46815835 ~ 46819263 (+) |
| G1180758 | NA | non-coding | upstream | 115044 | 46761732 ~ 46813138 (+) |
| G1180743 | NA | non-coding | upstream | 173331 | 46747266 ~ 46754851 (+) |
| G1180716 | NA | non-coding | upstream | 215065 | 46678134 ~ 46713117 (+) |
| G1180845 | NA | non-coding | downstream | 1126 | 46929524 ~ 46932162 (+) |
| G1181474 | NA | non-coding | downstream | 446377 | 47374775 ~ 47375077 (+) |
| G1181480 | NA | non-coding | downstream | 451402 | 47379800 ~ 47380035 (+) |
| G1181539 | NA | non-coding | downstream | 497589 | 47425987 ~ 47426300 (+) |
| LOC110485193 | LOC106601421 | other | upstream | 591904 | 46302751 ~ 46336386 (+) |
| G1180047 | NA | other | upstream | 654581 | 46239144 ~ 46273601 (+) |
| LOC118936304 | LOC106601427 | other | upstream | 751620 | 46173911 ~ 46176562 (+) |
| LOC110485192 | LOC106601391 | other | upstream | 1398054 | 45529398 ~ 45554103 (+) |
| G1179362 | NA | other | upstream | 1465239 | 45462588 ~ 45462943 (+) |
| G1181472 | NA | other | downstream | 445765 | 47374163 ~ 47374477 (+) |
| G1181636 | NA | other | downstream | 620881 | 47549279 ~ 47549548 (+) |
| G1181955 | NA | other | downstream | 813963 | 47742361 ~ 47743064 (+) |
| G1182153 | NA | other | downstream | 1191215 | 48119613 ~ 48122575 (+) |
