G1181473



Basic Information


Item Value
gene id G1181473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 47373943 ~ 47374514 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1347317
ggatttgatttgatttgatttagagcagtgatgttttggggctgttgctgggcaacacagactttcaactccctccaaagatgttctatggggttgagatctggagactggctaggccactccaggaccttgaaatgcttcttacgaagccacaccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcatcttcaatgcccttgctgatggaaggaggttttcactcaaaatctcacgatacatggccccattcattctttcctttacatggatcagtcgtcctggtccctttgcagaaaaacagccccaaagcatgatgtttccacccccatgattcacagtaggtatggtgttctttggatgcaactcagcattctttgtcctccaaacacgacgagttgagtttttaccaaaaagttctattttggtttcatctgaccatatgacattctcccaatcttcttctggatcatccaaatgctctctagcaaacttcagacgggcctggacatgtactggcttaagcagggggacacatctggc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1347317 True 572 lncRNA 0.47 1 47373943 47374514

Neighbor


gene id symbol gene type direction distance location
LOC110485195 LOC102192139 coding downstream 28009 46929363 ~ 47345934 (-)
LOC110486590 LOC105022923 coding downstream 458985 46827752 ~ 46915018 (-)
LOC118938312 NA coding downstream 812858 46553952 ~ 46561085 (-)
LOC110486586 ubald2 coding downstream 838230 46510585 ~ 46535713 (-)
LOC110486583 srsf2 coding downstream 886061 46484771 ~ 46487882 (-)
LOC110486593 LOC106606954 coding upstream 57892 47432406 ~ 47433949 (-)
LOC110486594 LOC106601485 coding upstream 85922 47460436 ~ 47466735 (-)
LOC110486596 LOC106606950 coding upstream 134410 47508924 ~ 47522717 (-)
LOC110486597 LOC106606951 coding upstream 190743 47565257 ~ 47597295 (-)
LOC110486599 NA coding upstream 233159 47607673 ~ 47611494 (-)
G1181305 NA non-coding downstream 208826 47164542 ~ 47165117 (-)
G1181243 NA non-coding downstream 294960 47078634 ~ 47078983 (-)
G1181081 NA non-coding downstream 467012 46810424 ~ 46906931 (-)
G1180729 NA non-coding downstream 629860 46677560 ~ 46744083 (-)
G1181492 NA non-coding upstream 11590 47386104 ~ 47386413 (-)
G1181493 NA non-coding upstream 13032 47387546 ~ 47387759 (-)
G1181515 NA non-coding upstream 28032 47402546 ~ 47403117 (-)
G1181516 NA non-coding upstream 28634 47403148 ~ 47403414 (-)
G1181512 NA non-coding upstream 34616 47409130 ~ 47410277 (-)
G1179621 LOC106607015 other downstream 1841281 45531858 ~ 45532662 (-)
G1179619 LOC106601391 other downstream 1843829 45529436 ~ 45530114 (-)
zgc:171844 LOC106607059 other downstream 2180638 45182660 ~ 45193315 (-)
LOC110486618 LOC106606909 other upstream 628517 47999581 ~ 48015951 (-)
G1183013 NA other upstream 650587 48025101 ~ 48025776 (-)
G1183126 NA other upstream 885010 48259524 ~ 48259989 (-)

Expression



Co-expression Network