G1181474


Basic Information

Item Value
gene id G1181474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 47374775 ~ 47375077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1347318
agcatggccgaataataataaggcagaacagttgaaactggagcagcagcacggtcaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaaggagagaattggagaacgcacacttagattcacacaggacaccgaataggacagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1347318 True 207 lncRNA 0.52 2 47374775 47375077

Neighbor

gene id symbol gene type direction distance location
LOC118938083 NA coding upstream 551797 46818538 ~ 46822978 (+)
LOC118938555 NA coding upstream 557776 46816007 ~ 46816999 (+)
LOC110486589 LOC106606959 coding upstream 702428 46571242 ~ 46672347 (+)
LOC110486588 LOC106602603 coding upstream 809103 46559808 ~ 46565672 (+)
foxj1a LOC106601528 coding upstream 826862 46542192 ~ 46547913 (+)
LOC110486591 LOC106606947 coding downstream 20253 47395330 ~ 47400760 (+)
LOC110486592 LOC106606958 coding downstream 28697 47403774 ~ 47410322 (+)
tmem100a LOC106606948 coding downstream 92935 47468012 ~ 47471205 (+)
LOC110486595 paqrb coding downstream 107161 47482238 ~ 47505989 (+)
LOC110486605 tmem220 coding downstream 455844 47830848 ~ 47832931 (+)
G1180845 NA non-coding upstream 442613 46929524 ~ 46932162 (+)
G1180844 NA non-coding upstream 446377 46928182 ~ 46928398 (+)
G1180776 NA non-coding upstream 547092 46810424 ~ 46827683 (+)
G1180779 NA non-coding upstream 555512 46815835 ~ 46819263 (+)
G1180758 NA non-coding upstream 561637 46761732 ~ 46813138 (+)
G1181480 NA non-coding downstream 4723 47379800 ~ 47380035 (+)
G1181539 NA non-coding downstream 50910 47425987 ~ 47426300 (+)
G1181547 NA non-coding downstream 55225 47430302 ~ 47430538 (+)
G1181552 LOC106580481 non-coding downstream 57318 47432395 ~ 47433957 (+)
G1181472 NA other upstream 298 47374163 ~ 47374477 (+)
LOC110485193 LOC106601421 other upstream 1038497 46302751 ~ 46336386 (+)
G1180047 NA other upstream 1101174 46239144 ~ 46273601 (+)
LOC118936304 LOC106601427 other upstream 1198213 46173911 ~ 46176562 (+)
LOC110485192 LOC106601391 other upstream 1844647 45529398 ~ 45554103 (+)
G1181636 NA other downstream 174202 47549279 ~ 47549548 (+)
G1181955 NA other downstream 367284 47742361 ~ 47743064 (+)
G1182153 NA other downstream 744536 48119613 ~ 48122575 (+)
G1182354 LOC106601550 other downstream 1180937 48556014 ~ 48561624 (+)

Expression


Co-expression Network