Gene
RNA
| Item | Value |
|---|---|
| gene id | G1181480 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 47379800 ~ 47380035 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1347324 | True | 236 | lncRNA | 0.37 | 1 | 47379800 | 47380035 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938083 | NA | coding | upstream | 556822 | 46818538 ~ 46822978 (+) |
| LOC118938555 | NA | coding | upstream | 562801 | 46816007 ~ 46816999 (+) |
| LOC110486589 | LOC106606959 | coding | upstream | 707453 | 46571242 ~ 46672347 (+) |
| LOC110486588 | LOC106602603 | coding | upstream | 814128 | 46559808 ~ 46565672 (+) |
| foxj1a | LOC106601528 | coding | upstream | 831887 | 46542192 ~ 46547913 (+) |
| LOC110486591 | LOC106606947 | coding | downstream | 15295 | 47395330 ~ 47400760 (+) |
| LOC110486592 | LOC106606958 | coding | downstream | 23739 | 47403774 ~ 47410322 (+) |
| tmem100a | LOC106606948 | coding | downstream | 87977 | 47468012 ~ 47471205 (+) |
| LOC110486595 | paqrb | coding | downstream | 102203 | 47482238 ~ 47505989 (+) |
| LOC110486605 | tmem220 | coding | downstream | 450886 | 47830848 ~ 47832931 (+) |
| G1181474 | NA | non-coding | upstream | 4723 | 47374775 ~ 47375077 (+) |
| G1180845 | NA | non-coding | upstream | 447638 | 46929524 ~ 46932162 (+) |
| G1180844 | NA | non-coding | upstream | 451402 | 46928182 ~ 46928398 (+) |
| G1180776 | NA | non-coding | upstream | 552117 | 46810424 ~ 46827683 (+) |
| G1180779 | NA | non-coding | upstream | 560537 | 46815835 ~ 46819263 (+) |
| G1181539 | NA | non-coding | downstream | 45952 | 47425987 ~ 47426300 (+) |
| G1181547 | NA | non-coding | downstream | 50267 | 47430302 ~ 47430538 (+) |
| G1181552 | LOC106580481 | non-coding | downstream | 52360 | 47432395 ~ 47433957 (+) |
| G1181569 | NA | non-coding | downstream | 63356 | 47443391 ~ 47443708 (+) |
| G1181472 | NA | other | upstream | 5323 | 47374163 ~ 47374477 (+) |
| LOC110485193 | LOC106601421 | other | upstream | 1043522 | 46302751 ~ 46336386 (+) |
| G1180047 | NA | other | upstream | 1106199 | 46239144 ~ 46273601 (+) |
| LOC118936304 | LOC106601427 | other | upstream | 1203238 | 46173911 ~ 46176562 (+) |
| LOC110485192 | LOC106601391 | other | upstream | 1849672 | 45529398 ~ 45554103 (+) |
| G1181636 | NA | other | downstream | 169244 | 47549279 ~ 47549548 (+) |
| G1181955 | NA | other | downstream | 362326 | 47742361 ~ 47743064 (+) |
| G1182153 | NA | other | downstream | 739578 | 48119613 ~ 48122575 (+) |
| G1182354 | LOC106601550 | other | downstream | 1175979 | 48556014 ~ 48561624 (+) |
