G1181539


Basic Information

Item Value
gene id G1181539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 47425987 ~ 47426300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1347386
aggtaaaagggatcttgaagaaggaaggctaatactccattttgcaacgccatgccatactctgtggacggcgcttaattggagccaatttcctccttcaacaggacaatgacccaaagcacagctccaaactatgcaataactatttagggaagaagcagtcagctggtattctgcctacaatggagtggccagcacagtcaccggatctcaaccctattgagctgttgtgggagcagcttgaccgtatgtaagaagtgcccatcaagccaatccaatttgtgggacGTGCTACAGGATGCATgaggtgaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1347386 True 314 lncRNA 0.47 1 47425987 47426300

Neighbor

gene id symbol gene type direction distance location
LOC110486592 LOC106606958 coding upstream 15665 47403774 ~ 47410322 (+)
LOC110486591 LOC106606947 coding upstream 25227 47395330 ~ 47400760 (+)
LOC118938083 NA coding upstream 603009 46818538 ~ 46822978 (+)
LOC118938555 NA coding upstream 608988 46816007 ~ 46816999 (+)
LOC110486589 LOC106606959 coding upstream 753640 46571242 ~ 46672347 (+)
tmem100a LOC106606948 coding downstream 41712 47468012 ~ 47471205 (+)
LOC110486595 paqrb coding downstream 55938 47482238 ~ 47505989 (+)
LOC110486605 tmem220 coding downstream 404621 47830848 ~ 47832931 (+)
LOC110486603 LOC106606941 coding downstream 406934 47833234 ~ 47836337 (+)
LOC110485199 NA coding downstream 421112 47847412 ~ 47858242 (+)
G1181480 NA non-coding upstream 45952 47379800 ~ 47380035 (+)
G1181474 NA non-coding upstream 50910 47374775 ~ 47375077 (+)
G1180845 NA non-coding upstream 493825 46929524 ~ 46932162 (+)
G1180844 NA non-coding upstream 497589 46928182 ~ 46928398 (+)
G1181547 NA non-coding downstream 4002 47430302 ~ 47430538 (+)
G1181552 LOC106580481 non-coding downstream 6095 47432395 ~ 47433957 (+)
G1181569 NA non-coding downstream 17091 47443391 ~ 47443708 (+)
G1181572 NA non-coding downstream 19254 47445554 ~ 47445922 (+)
G1181579 NA non-coding downstream 20692 47446992 ~ 47447613 (+)
G1181472 NA other upstream 51510 47374163 ~ 47374477 (+)
LOC110485193 LOC106601421 other upstream 1089709 46302751 ~ 46336386 (+)
G1180047 NA other upstream 1152386 46239144 ~ 46273601 (+)
LOC118936304 LOC106601427 other upstream 1249425 46173911 ~ 46176562 (+)
LOC110485192 LOC106601391 other upstream 1895859 45529398 ~ 45554103 (+)
G1181636 NA other downstream 122979 47549279 ~ 47549548 (+)
G1181955 NA other downstream 316061 47742361 ~ 47743064 (+)
G1182153 NA other downstream 693313 48119613 ~ 48122575 (+)
G1182354 LOC106601550 other downstream 1129714 48556014 ~ 48561624 (+)

Expression


Co-expression Network