G1181586


Basic Information

Item Value
gene id G1181586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 47458193 ~ 47458412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1347439
gatctttgtgggctatactcggccttgtctcaggatggtaagttggtggttgaagatatccctctagtggtgtgggggctgtgctttggcaaagtgggtggggttatatccttcctgtttggccctgtccgggggtgtcatcggatggggccacagtgtctcctgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcggggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1347439 True 220 lncRNA 0.55 1 47458193 47458412

Neighbor

gene id symbol gene type direction distance location
LOC110486592 LOC106606958 coding upstream 47871 47403774 ~ 47410322 (+)
LOC110486591 LOC106606947 coding upstream 57433 47395330 ~ 47400760 (+)
LOC118938083 NA coding upstream 635215 46818538 ~ 46822978 (+)
LOC118938555 NA coding upstream 641194 46816007 ~ 46816999 (+)
LOC110486589 LOC106606959 coding upstream 785846 46571242 ~ 46672347 (+)
tmem100a LOC106606948 coding downstream 9600 47468012 ~ 47471205 (+)
LOC110486595 paqrb coding downstream 23826 47482238 ~ 47505989 (+)
LOC110486605 tmem220 coding downstream 372509 47830848 ~ 47832931 (+)
LOC110486603 LOC106606941 coding downstream 374822 47833234 ~ 47836337 (+)
LOC110485199 NA coding downstream 389000 47847412 ~ 47858242 (+)
G1181579 NA non-coding upstream 10580 47446992 ~ 47447613 (+)
G1181572 NA non-coding upstream 12271 47445554 ~ 47445922 (+)
G1181569 NA non-coding upstream 14485 47443391 ~ 47443708 (+)
G1181552 LOC106580481 non-coding upstream 24236 47432395 ~ 47433957 (+)
G1181547 NA non-coding upstream 27655 47430302 ~ 47430538 (+)
G1181587 NA non-coding downstream 51 47458463 ~ 47458695 (+)
G1181611 NA non-coding downstream 47859 47506271 ~ 47506726 (+)
G1181612 NA non-coding downstream 49083 47507495 ~ 47507774 (+)
G1181606 NA non-coding downstream 50539 47508951 ~ 47512098 (+)
G1181615 NA non-coding downstream 64812 47523224 ~ 47523453 (+)
G1181472 NA other upstream 83716 47374163 ~ 47374477 (+)
LOC110485193 LOC106601421 other upstream 1121915 46302751 ~ 46336386 (+)
G1180047 NA other upstream 1184592 46239144 ~ 46273601 (+)
LOC118936304 LOC106601427 other upstream 1281631 46173911 ~ 46176562 (+)
LOC110485192 LOC106601391 other upstream 1928065 45529398 ~ 45554103 (+)
G1181636 NA other downstream 90867 47549279 ~ 47549548 (+)
G1181955 NA other downstream 283949 47742361 ~ 47743064 (+)
G1182153 NA other downstream 661201 48119613 ~ 48122575 (+)
G1182354 LOC106601550 other downstream 1097602 48556014 ~ 48561624 (+)

Expression


Co-expression Network