G1181612


Basic Information

Item Value
gene id G1181612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 47507495 ~ 47507774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1347482
caaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctgacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccccatcaggttttcttccagaatggtcctgtatttggctccatccatctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1347482 True 280 lncRNA 0.43 1 47507495 47507774

Neighbor

gene id symbol gene type direction distance location
LOC110486595 paqrb coding upstream 1506 47482238 ~ 47505989 (+)
tmem100a LOC106606948 coding upstream 36290 47468012 ~ 47471205 (+)
LOC110486592 LOC106606958 coding upstream 97173 47403774 ~ 47410322 (+)
LOC110486591 LOC106606947 coding upstream 106735 47395330 ~ 47400760 (+)
LOC118938083 NA coding upstream 684517 46818538 ~ 46822978 (+)
LOC110486605 tmem220 coding downstream 323147 47830848 ~ 47832931 (+)
LOC110486603 LOC106606941 coding downstream 325460 47833234 ~ 47836337 (+)
LOC110485199 NA coding downstream 339638 47847412 ~ 47858242 (+)
LOC110486607 LOC106601502 coding downstream 367632 47875406 ~ 47912448 (+)
LOC110486609 LOC106601450 coding downstream 419273 47927047 ~ 47932749 (+)
G1181611 NA non-coding upstream 769 47506271 ~ 47506726 (+)
G1181587 NA non-coding upstream 48800 47458463 ~ 47458695 (+)
G1181586 NA non-coding upstream 49083 47458193 ~ 47458412 (+)
G1181579 NA non-coding upstream 59882 47446992 ~ 47447613 (+)
G1181572 NA non-coding upstream 61573 47445554 ~ 47445922 (+)
G1181606 NA non-coding downstream 1177 47508951 ~ 47512098 (+)
G1181615 NA non-coding downstream 15450 47523224 ~ 47523453 (+)
G1181616 NA non-coding downstream 16088 47523862 ~ 47524063 (+)
G1181628 NA non-coding downstream 31653 47539427 ~ 47539748 (+)
G1181645 NA non-coding downstream 49880 47557654 ~ 47557853 (+)
G1181472 NA other upstream 133018 47374163 ~ 47374477 (+)
LOC110485193 LOC106601421 other upstream 1171217 46302751 ~ 46336386 (+)
G1180047 NA other upstream 1233894 46239144 ~ 46273601 (+)
LOC118936304 LOC106601427 other upstream 1330933 46173911 ~ 46176562 (+)
G1181636 NA other downstream 41505 47549279 ~ 47549548 (+)
G1181955 NA other downstream 234587 47742361 ~ 47743064 (+)
G1182153 NA other downstream 611839 48119613 ~ 48122575 (+)
G1182354 LOC106601550 other downstream 1048240 48556014 ~ 48561624 (+)
G1182541 NA other downstream 1438975 48946749 ~ 48947969 (+)

Expression


Co-expression Network