G1181709


Basic Information

Item Value
gene id G1181709
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 47508193 ~ 47508798 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1347593
TAGctgtagtatattggccatatacagtaccttgtatttggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgagaatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctctgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaaacgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagact

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1347593 True 606 lncRNA 0.40 1 47508193 47508798

Neighbor

gene id symbol gene type direction distance location
LOC110486594 LOC106601485 coding downstream 41458 47460436 ~ 47466735 (-)
LOC110486593 LOC106606954 coding downstream 74244 47432406 ~ 47433949 (-)
LOC110485195 LOC102192139 coding downstream 162259 46929363 ~ 47345934 (-)
LOC110486590 LOC105022923 coding downstream 593235 46827752 ~ 46915018 (-)
LOC118938312 NA coding downstream 947108 46553952 ~ 46561085 (-)
LOC110486596 LOC106606950 coding upstream 126 47508924 ~ 47522717 (-)
LOC110486597 LOC106606951 coding upstream 56459 47565257 ~ 47597295 (-)
LOC110486599 NA coding upstream 98875 47607673 ~ 47611494 (-)
LOC110487550 LOC106601487 coding upstream 103483 47612281 ~ 47614372 (-)
LOC110486600 LOC106606953 coding upstream 129776 47638574 ~ 47707551 (-)
G1181700 NA non-coding downstream 23516 47483922 ~ 47484677 (-)
G1181559 NA non-coding downstream 72188 47435780 ~ 47436005 (-)
G1181548 NA non-coding downstream 77493 47430475 ~ 47430700 (-)
G1181529 NA non-coding downstream 89432 47418494 ~ 47418761 (-)
G1181720 NA non-coding upstream 19480 47528278 ~ 47528543 (-)
G1181722 NA non-coding upstream 22842 47531640 ~ 47531875 (-)
G1181727 NA non-coding upstream 26746 47535544 ~ 47535774 (-)
G1181735 NA non-coding upstream 34694 47543492 ~ 47543735 (-)
G1181687 NA non-coding upstream 54273 47563071 ~ 47563563 (-)
LOC110486586 ubald2 other downstream 972548 46510585 ~ 46535713 (-)
G1179621 LOC106607015 other downstream 1975531 45531858 ~ 45532662 (-)
LOC110486618 LOC106606909 other upstream 494233 47999581 ~ 48015951 (-)
G1183013 NA other upstream 516303 48025101 ~ 48025776 (-)
G1183126 NA other upstream 750726 48259524 ~ 48259989 (-)
G1183190 NA other upstream 852800 48361598 ~ 48365100 (-)
G1183192 NA other upstream 855258 48364056 ~ 48376966 (-)

Expression


Co-expression Network