Gene
RNA
| Item | Value |
|---|---|
| gene id | G1181727 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 47535544 ~ 47535774 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107670751 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1347611 | True | 231 | lncRNA | 0.40 | 1 | 47535544 | 47535774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486596 | LOC106606950 | coding | downstream | 12827 | 47508924 ~ 47522717 (-) |
| LOC110486594 | LOC106601485 | coding | downstream | 68809 | 47460436 ~ 47466735 (-) |
| LOC110486593 | LOC106606954 | coding | downstream | 101595 | 47432406 ~ 47433949 (-) |
| LOC110485195 | LOC102192139 | coding | downstream | 189610 | 46929363 ~ 47345934 (-) |
| LOC110486590 | LOC105022923 | coding | downstream | 620586 | 46827752 ~ 46915018 (-) |
| LOC110486597 | LOC106606951 | coding | upstream | 29483 | 47565257 ~ 47597295 (-) |
| LOC110486599 | NA | coding | upstream | 71899 | 47607673 ~ 47611494 (-) |
| LOC110487550 | LOC106601487 | coding | upstream | 76507 | 47612281 ~ 47614372 (-) |
| LOC110486600 | LOC106606953 | coding | upstream | 102800 | 47638574 ~ 47707551 (-) |
| LOC110486601 | rnz2 | coding | upstream | 270450 | 47806224 ~ 47815064 (-) |
| G1181722 | NA | non-coding | downstream | 3669 | 47531640 ~ 47531875 (-) |
| G1181720 | NA | non-coding | downstream | 7001 | 47528278 ~ 47528543 (-) |
| G1181709 | NA | non-coding | downstream | 26746 | 47508193 ~ 47508798 (-) |
| G1181700 | NA | non-coding | downstream | 50867 | 47483922 ~ 47484677 (-) |
| G1181559 | NA | non-coding | downstream | 99539 | 47435780 ~ 47436005 (-) |
| G1181735 | NA | non-coding | upstream | 7718 | 47543492 ~ 47543735 (-) |
| G1181687 | NA | non-coding | upstream | 27297 | 47563071 ~ 47563563 (-) |
| G1181913 | NA | non-coding | upstream | 172946 | 47708720 ~ 47709006 (-) |
| G1181931 | NA | non-coding | upstream | 189523 | 47725297 ~ 47725589 (-) |
| G1181958 | NA | non-coding | upstream | 209231 | 47745005 ~ 47745348 (-) |
| LOC110486586 | ubald2 | other | downstream | 999899 | 46510585 ~ 46535713 (-) |
| G1179621 | LOC106607015 | other | downstream | 2002882 | 45531858 ~ 45532662 (-) |
| LOC110486618 | LOC106606909 | other | upstream | 467257 | 47999581 ~ 48015951 (-) |
| G1183013 | NA | other | upstream | 489327 | 48025101 ~ 48025776 (-) |
| G1183126 | NA | other | upstream | 723750 | 48259524 ~ 48259989 (-) |
| G1183190 | NA | other | upstream | 825824 | 48361598 ~ 48365100 (-) |
| G1183192 | NA | other | upstream | 828282 | 48364056 ~ 48376966 (-) |
