G1181645


Basic Information

Item Value
gene id G1181645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 47557654 ~ 47557853 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1347515
ggtgatggcggcggatgaatggcaagacaatgggcctcaagatctcatcacggtatctctgtgcttttaaattgctattgataaaatgcaattgtgttcgttgtccgtagcttatgcctgcacgtaccataaccccactgccaccatggggcactctgttcacaacgttgacatcagcaaaccactcgcccacacgacac

Function

NR:

description
hypothetical protein EH28_01411

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1347515 True 200 lncRNA 0.50 1 47557654 47557853

Neighbor

gene id symbol gene type direction distance location
LOC110486595 paqrb coding upstream 51665 47482238 ~ 47505989 (+)
tmem100a LOC106606948 coding upstream 86449 47468012 ~ 47471205 (+)
LOC110486592 LOC106606958 coding upstream 147332 47403774 ~ 47410322 (+)
LOC110486591 LOC106606947 coding upstream 156894 47395330 ~ 47400760 (+)
LOC118938083 NA coding upstream 734676 46818538 ~ 46822978 (+)
LOC110486605 tmem220 coding downstream 273068 47830848 ~ 47832931 (+)
LOC110486603 LOC106606941 coding downstream 275381 47833234 ~ 47836337 (+)
LOC110485199 NA coding downstream 289559 47847412 ~ 47858242 (+)
LOC110486607 LOC106601502 coding downstream 317553 47875406 ~ 47912448 (+)
LOC110486609 LOC106601450 coding downstream 369194 47927047 ~ 47932749 (+)
G1181628 NA non-coding upstream 17906 47539427 ~ 47539748 (+)
G1181616 NA non-coding upstream 33591 47523862 ~ 47524063 (+)
G1181615 NA non-coding upstream 34201 47523224 ~ 47523453 (+)
G1181606 NA non-coding upstream 45556 47508951 ~ 47512098 (+)
G1181612 NA non-coding upstream 49880 47507495 ~ 47507774 (+)
G1181650 NA non-coding downstream 7178 47565031 ~ 47567116 (+)
G1181660 NA non-coding downstream 40217 47598070 ~ 47598236 (+)
G1181774 NA non-coding downstream 43802 47601655 ~ 47703167 (+)
G1181927 NA non-coding downstream 166971 47724824 ~ 47725173 (+)
G1181941 NA non-coding downstream 174277 47732130 ~ 47732387 (+)
G1181636 NA other upstream 8106 47549279 ~ 47549548 (+)
G1181472 NA other upstream 183177 47374163 ~ 47374477 (+)
LOC110485193 LOC106601421 other upstream 1221376 46302751 ~ 46336386 (+)
G1180047 NA other upstream 1284053 46239144 ~ 46273601 (+)
G1181955 NA other downstream 184508 47742361 ~ 47743064 (+)
G1182153 NA other downstream 561760 48119613 ~ 48122575 (+)
G1182354 LOC106601550 other downstream 998161 48556014 ~ 48561624 (+)
G1182541 NA other downstream 1388896 48946749 ~ 48947969 (+)
G1182555 NA other downstream 1420147 48978000 ~ 48981403 (+)

Expression


Co-expression Network