Gene
RNA
| Item | Value |
|---|---|
| gene id | G1182997 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 47969809 ~ 47970255 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1349097 | True | 223 | lncRNA | 0.45 | 2 | 47969809 | 47970255 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486613 | LOC106601452 | coding | downstream | 15755 | 47948324 ~ 47954054 (-) |
| LOC110486611 | LOC106601455 | coding | downstream | 21673 | 47945361 ~ 47948136 (-) |
| LOC110486608 | LOC106601451 | coding | downstream | 35470 | 47933041 ~ 47934339 (-) |
| LOC110486610 | reco | coding | downstream | 48039 | 47919564 ~ 47921770 (-) |
| LOC110486606 | LOC105899468 | coding | downstream | 97955 | 47860198 ~ 47871854 (-) |
| LOC110486618 | LOC106606909 | coding | upstream | 29326 | 47999581 ~ 48015951 (-) |
| LOC110486619 | LOC106606937 | coding | upstream | 71415 | 48041670 ~ 48072432 (-) |
| LOC110486622 | LOC106601465 | coding | upstream | 139202 | 48109457 ~ 48118413 (-) |
| LOC110486627 | apol3 | coding | upstream | 240498 | 48210753 ~ 48215730 (-) |
| LOC118938313 | apol3 | coding | upstream | 250903 | 48221158 ~ 48224723 (-) |
| G1182996 | NA | non-coding | downstream | 83 | 47968196 ~ 47969726 (-) |
| G1182993 | NA | non-coding | downstream | 6999 | 47962292 ~ 47962810 (-) |
| G1182992 | NA | non-coding | downstream | 7538 | 47961927 ~ 47962271 (-) |
| G1182954 | NA | non-coding | downstream | 79009 | 47890593 ~ 47890800 (-) |
| G1181978 | NA | non-coding | downstream | 212162 | 47757427 ~ 47757647 (-) |
| G1183001 | NA | non-coding | upstream | 18458 | 47988713 ~ 47991990 (-) |
| G1183020 | NA | non-coding | upstream | 63730 | 48033985 ~ 48034365 (-) |
| G1183021 | NA | non-coding | upstream | 65230 | 48035485 ~ 48035728 (-) |
| G1183047 | NA | non-coding | upstream | 149116 | 48119371 ~ 48136180 (-) |
| G1183089 | NA | non-coding | upstream | 219413 | 48189668 ~ 48189893 (-) |
| LOC110486594 | LOC106601485 | other | downstream | 503123 | 47460436 ~ 47466735 (-) |
| LOC110486593 | LOC106606954 | other | downstream | 536412 | 47432406 ~ 47433949 (-) |
| LOC110486590 | LOC105022923 | other | downstream | 1054791 | 46827752 ~ 46915018 (-) |
| LOC110486586 | ubald2 | other | downstream | 1434164 | 46510585 ~ 46535713 (-) |
| G1179621 | LOC106607015 | other | downstream | 2437147 | 45531858 ~ 45532662 (-) |
| G1183013 | NA | other | upstream | 54846 | 48025101 ~ 48025776 (-) |
| G1183126 | NA | other | upstream | 289269 | 48259524 ~ 48259989 (-) |
| G1183190 | NA | other | upstream | 391343 | 48361598 ~ 48365100 (-) |
| G1183192 | NA | other | upstream | 393801 | 48364056 ~ 48376966 (-) |
