G1183047


Basic Information

Item Value
gene id G1183047
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 48119371 ~ 48136180 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1349153
GTTTATCTGGCATAATGCACGGCTGGCGGGCGATGACTTGGGCGACATTAAATCTCAACAACTATGCAGTATAAGGACTAAGAGCAGAATACAAAGTGTTCCATTATACTGTACAGCTCTGTGAACGACAATCATTAAAATTACAGATAATCAATCAATCGCTGATTCAGTCATATCCAATCACAAACCCAGAGTGACCACTGTATATGTGACCACTGTATACCAATCATGGTAGATCGCTGATGCACTATCACTAATTCAGGATCCCAGAGACCTACATACCTATCTCTTTGGCTAGTGCTAAGCCTTGTGGGTAGGTGATGGGCGCTAGCTTCTTCTCCTTCAGCTTCTCAATGGTTTCCTTCTCGTCCCTCAGATCCAGCTTGGTGCCCACGAGGATGATGGGTGTGGAGGGGCAGTGGTGTCGTACCTCAGGGTACCACTTGGCTCTGACGTTCTCAAACGATGCTGGGCTCACCAGAGAGAAACAGATGAGGAACACATCCGTCTGAGGATAGGACAGAGGTCTGAGTCTGTCATAGTCCTCCTGTCCTGCTGTATCCCACAGTCCCAGGTTCACTGGCTTACTGTCCACCATCACATTGGCTGAGTAGTTATCAAACACTGTGGGGATGTACTCTCCTGGGAAGGCGTTGGTTGTGTAGCTGATGAGCAGGCATGTCTTTCCCACAGCACCATCTCCAACCACCACACACTTGATGGCTTGCATTTTCCAGGGGCTGATTTAACAACTTGTGAGTTTACACTTAGTAGGCAAGACAACAATGTAGAATCAGGTACAGTACAGGAAATACGTTTGCCTATCTTATCTTACCCACCGCCTCGACTCTCGCG
>TU1349152
GATGGTGCAATACATTTCTGACTATACACACTGTAATGTTTGGTCTATGTATTTTTCAGTGTCTTTCTTgtacagtaaggatcagtcacTGCATTAACAAATCATATAGATGAAGTGTATAAGAAAATGAGTCAGAAACCAAAACCAAATACCAATATATGAATCTAAAACACTTATCCATGTGTACGTATCCAGGATTTGTCTTGAAAATATTAAGGACATTTATATTGATGCTCCAGAAAGTCTGATGGTTGTTTTCAGACCTGAACAGTGGTCTAACATTGAGAAGAATCGTAGATCCAGCTATATGCCTCAATCCCCAACCAGTGGGAAAGGTAGGCACCATCTGTAATGGTACAATTATCTTGAACTATCTTCCATTCATTTGGGATTGAGgcatacactatatactgtaattATAGCTGGATATACACTACAGATGGCAAGACTCAACACTACATATGTTGACTCATCTGAACATTAGACCACTTTGTAAAACTGCCAAACTTTGTATTTAACTAAAATCAACATTTGCTGTTGTGTGATTCCTGAGCCCTTCCCTCTTGGTCTATCcacaggtctgagatcagatgAGTAGACAGGGTCGTTTCTTCACCTTGGTGGGCTGGGGGCACAGCACCGCTCGGATGGCCTCGTCAAAGACCGTCTTCAGCCCCCGCTGGGTCAGGGCAGAGCATTCCAGGTACTTCACCGAGTCTATCTCTTTGGCTAGTGCTAAGCCTTGTGGGTAGGTGATGGGCGCTAGCTTCTTCTCCTTCAGCTTCTCAATGGTTTCCTTCTCGTCCCTCAGATCCAGCTTGGTGCCCACGAGGATGATGGGTGTGGAGGGGCAGTGGTGTCGTACCTCAGGGTACCACTAGAGggagcaagcacacacacacacagagtcggTCAACATGGCCGCAGCAAAATATACTGAATTACTTTTCACTTCCTTTTTGGTGATACAGCT

Function

NR:

description
ras-related C3 botulinum toxin substrate 2-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1349153 False 855 lncRNA 0.48 5 48119371 48135412
TU1349152 True 973 lncRNA 0.44 2 48134875 48136180

Neighbor

gene id symbol gene type direction distance location
LOC110486622 LOC106601465 coding downstream 958 48109457 ~ 48118413 (-)
LOC110486619 LOC106606937 coding downstream 46939 48041670 ~ 48072432 (-)
LOC110486618 LOC106606909 coding downstream 103422 47999581 ~ 48015951 (-)
LOC110486613 LOC106601452 coding downstream 165317 47948324 ~ 47954054 (-)
LOC110486611 LOC106601455 coding downstream 171235 47945361 ~ 47948136 (-)
LOC110486627 apol3 coding upstream 74573 48210753 ~ 48215730 (-)
LOC118938313 apol3 coding upstream 84978 48221158 ~ 48224723 (-)
LOC118936490 LOC106601559 coding upstream 113750 48249930 ~ 48252505 (-)
LOC110486633 rl3 coding upstream 285471 48421651 ~ 48426322 (-)
LOC118938618 NA coding upstream 285687 48421867 ~ 48421998 (-)
G1183021 NA non-coding downstream 83643 48035485 ~ 48035728 (-)
G1183020 NA non-coding downstream 85006 48033985 ~ 48034365 (-)
G1183001 NA non-coding downstream 127381 47988713 ~ 47991990 (-)
G1182997 NA non-coding downstream 149116 47969809 ~ 47970255 (-)
G1182996 NA non-coding downstream 149645 47968196 ~ 47969726 (-)
G1183089 NA non-coding upstream 53488 48189668 ~ 48189893 (-)
G1183098 LOC106606913 non-coding upstream 62022 48198202 ~ 48204974 (-)
G1183104 NA non-coding upstream 72086 48208266 ~ 48210022 (-)
G1183122 NA non-coding upstream 119270 48255450 ~ 48255662 (-)
G1183135 NA non-coding upstream 134545 48270725 ~ 48271035 (-)
G1183013 NA other downstream 93595 48025101 ~ 48025776 (-)
LOC110486594 LOC106601485 other downstream 652685 47460436 ~ 47466735 (-)
LOC110486593 LOC106606954 other downstream 685974 47432406 ~ 47433949 (-)
LOC110486590 LOC105022923 other downstream 1204353 46827752 ~ 46915018 (-)
G1183126 NA other upstream 123344 48259524 ~ 48259989 (-)
G1183190 NA other upstream 225418 48361598 ~ 48365100 (-)
G1183192 NA other upstream 227876 48364056 ~ 48376966 (-)
G1183196 NA other upstream 243087 48379267 ~ 48389718 (-)
G1183225 NA other upstream 299646 48435826 ~ 48470983 (-)

Expression


Co-expression Network