G1182204


Basic Information

Item Value
gene id G1182204
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 48196808 ~ 48197030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348185
cgtaaatgtcaTATTTACGTTTTGTTTTAAGcaatgcaaaaatgtctaaaaacctgtttttgctttgtcattatagggtattatgtttagattgatgagggggaaaaaaacaatttaatccattttagaataaggctgtaacgtaacagaatgtggaaaagttcaaggggtctgaataatttctgtATATGTACTGATGTGTGagtaactgtcagtaatgtgt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348185 True 223 lncRNA 0.31 1 48196808 48197030

Neighbor

gene id symbol gene type direction distance location
sstr3 LOC106601468 coding upstream 29942 48148399 ~ 48166866 (+)
rac2 LOC106601467 coding upstream 60489 48119316 ~ 48136319 (+)
LOC110486620 LOC106601507 coding upstream 94778 48093008 ~ 48102030 (+)
LOC110486621 grap2 coding upstream 105492 48075981 ~ 48091316 (+)
LOC110487551 LOC106606928 coding upstream 159263 48033192 ~ 48037545 (+)
LOC110486624 LOC106606913 coding downstream 484 48197514 ~ 48204821 (+)
LOC110486626 LOC106606914 coding downstream 22949 48219979 ~ 48231937 (+)
LOC110485200 cacng2 coding downstream 82812 48279842 ~ 48360869 (+)
LOC110486632 LOC106601556 coding downstream 278774 48475804 ~ 48486385 (+)
LOC110486639 rund1 coding downstream 291415 48488445 ~ 48493519 (+)
G1182196 NA non-coding upstream 8726 48187839 ~ 48188082 (+)
G1182182 NA non-coding upstream 28757 48167065 ~ 48168051 (+)
G1182130 NA non-coding upstream 88667 48107776 ~ 48108141 (+)
G1182110 NA non-coding upstream 164404 48032178 ~ 48032404 (+)
G1182240 NA non-coding downstream 73580 48270610 ~ 48270827 (+)
G1182275 NA non-coding downstream 142676 48339706 ~ 48340100 (+)
G1182308 rl3 non-coding downstream 224300 48421330 ~ 48445610 (+)
G1182331 NA non-coding downstream 257261 48454291 ~ 48462154 (+)
G1182318 NA non-coding downstream 267850 48464880 ~ 48467408 (+)
G1182153 NA other upstream 74233 48119613 ~ 48122575 (+)
G1181955 NA other upstream 453744 47742361 ~ 47743064 (+)
G1181636 NA other upstream 647260 47549279 ~ 47549548 (+)
tmem100a LOC106606948 other upstream 726796 47468012 ~ 47471205 (+)
G1181472 NA other upstream 822331 47374163 ~ 47374477 (+)
G1182354 LOC106601550 other downstream 358984 48556014 ~ 48561624 (+)
G1182541 NA other downstream 749719 48946749 ~ 48947969 (+)
G1182555 NA other downstream 780970 48978000 ~ 48981403 (+)
G1182595 NA other downstream 866755 49063785 ~ 49065142 (+)
G1182629 NA other downstream 917945 49114975 ~ 49118697 (+)

Expression


Co-expression Network