G1182341


Basic Information

Item Value
gene id G1182341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 48516084 ~ 48516283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348332
CTCCTGGGGATTTCTCCTGGGGATTTGTTCTACCCTGTAGCAAAACAAATGACAAATCCATGTCACTGAGATTTGTGCTCTGGAGTTTGGAGCATTGTGAAGAACAttaaaatcattcaaaatacttcaccagaaagcatgacttagccacagaggatcgtTAGCTTATTTTTAAAAAATAGCAGTGGATTGTTTAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348332 True 200 lncRNA 0.38 1 48516084 48516283

Neighbor

gene id symbol gene type direction distance location
ifi35 LOC106606925 coding upstream 9876 48500511 ~ 48506208 (+)
LOC110486640 LOC106601555 coding upstream 17409 48496613 ~ 48498675 (+)
LOC110486639 rund1 coding upstream 22565 48488445 ~ 48493519 (+)
LOC110486632 LOC106601556 coding upstream 29699 48475804 ~ 48486385 (+)
LOC110485200 cacng2 coding upstream 155215 48279842 ~ 48360869 (+)
LOC110486644 LOC106601551 coding downstream 16227 48532510 ~ 48540487 (+)
LOC110486647 LOC106601548 coding downstream 82695 48598978 ~ 48622758 (+)
LOC110486650 akts1 coding downstream 181920 48698203 ~ 48704379 (+)
LOC110486653 LOC106601538 coding downstream 231732 48748015 ~ 48796028 (+)
LOC110486658 NA coding downstream 441494 48957777 ~ 48959202 (+)
G1182334 NA non-coding upstream 37474 48470203 ~ 48478610 (+)
G1182317 NA non-coding upstream 43413 48469378 ~ 48472671 (+)
G1182318 NA non-coding upstream 48676 48464880 ~ 48467408 (+)
G1182331 NA non-coding upstream 53930 48454291 ~ 48462154 (+)
G1182342 NA non-coding downstream 298 48516581 ~ 48520449 (+)
G1182344 NA non-coding downstream 12631 48528914 ~ 48529433 (+)
G1182350 NA non-coding downstream 20544 48536827 ~ 48537060 (+)
G1182359 NA non-coding downstream 47534 48563817 ~ 48564807 (+)
G1182153 NA other upstream 393509 48119613 ~ 48122575 (+)
G1181955 NA other upstream 773020 47742361 ~ 47743064 (+)
G1181636 NA other upstream 966536 47549279 ~ 47549548 (+)
tmem100a LOC106606948 other upstream 1046072 47468012 ~ 47471205 (+)
G1181472 NA other upstream 1141607 47374163 ~ 47374477 (+)
G1182354 LOC106601550 other downstream 39731 48556014 ~ 48561624 (+)
G1182541 NA other downstream 430466 48946749 ~ 48947969 (+)
G1182555 NA other downstream 461717 48978000 ~ 48981403 (+)
G1182595 NA other downstream 547502 49063785 ~ 49065142 (+)
G1182629 NA other downstream 598692 49114975 ~ 49118697 (+)

Expression


Co-expression Network