G1182354 (LOC106601550)


Basic Information

Item Value
gene id G1182354
gene name LOC106601550
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 48556014 ~ 48561624 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348348
CGGTGCCCAGGGCAGTGATCCAGGCCTGGAAGATCCCGGAGTAGAAGGTGAAGGGGCTCTTCCTTGTGATGGAGAAGAAGATGAGTGGCAGGATAATGCCCCCGTGGATCATTAGGCCCACTATGACAGTCACCATGTACATGCCCAGCTGTCTAGCCACCACCTCCAGGTCCCCGATGGCTGCTATCTTCCCTGAGATCAGAGAGGCGATACCAACTGGAGAGTACCACATGATCATGCCCACCATCTTCATGATGATCTCATTGAGGATGTTGAAGAACTCTGACATGAGCTTCCCCTtctcacccatcttccccatgcACATTCCAAATGTGATGAAGAACCCAATTAAACCCAGAACATTCATGCCCCATTTGAACTCCAGTTTCTTCTTGCTGACTATGACAGGTTCTGTCTGGTTCGGGAGCATCACTGACACTTTCTTTGCTACTGTTT

Function

NR:

description
PREDICTED: excitatory amino acid transporter 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348348 True 456 TUCP 0.50 3 48556014 48561624

Neighbor

gene id symbol gene type direction distance location
LOC110486644 LOC106601551 coding upstream 15527 48532510 ~ 48540487 (+)
ifi35 LOC106606925 coding upstream 49806 48500511 ~ 48506208 (+)
LOC110486640 LOC106601555 coding upstream 57339 48496613 ~ 48498675 (+)
LOC110486639 rund1 coding upstream 62495 48488445 ~ 48493519 (+)
LOC110486632 LOC106601556 coding upstream 69629 48475804 ~ 48486385 (+)
LOC110486647 LOC106601548 coding downstream 37354 48598978 ~ 48622758 (+)
LOC110486650 akts1 coding downstream 136579 48698203 ~ 48704379 (+)
LOC110486653 LOC106601538 coding downstream 186391 48748015 ~ 48796028 (+)
LOC110486658 NA coding downstream 396153 48957777 ~ 48959202 (+)
LOC118938637 NA coding downstream 396565 48958189 ~ 48958276 (+)
G1182350 NA non-coding upstream 18954 48536827 ~ 48537060 (+)
G1182344 NA non-coding upstream 26581 48528914 ~ 48529433 (+)
G1182342 NA non-coding upstream 35565 48516581 ~ 48520449 (+)
G1182341 NA non-coding upstream 39731 48516084 ~ 48516283 (+)
G1182359 NA non-coding downstream 2193 48563817 ~ 48564807 (+)
G1182416 NA non-coding downstream 100501 48662125 ~ 48662517 (+)
G1182422 NA non-coding downstream 103593 48665217 ~ 48665595 (+)
G1182449 NA non-coding downstream 163547 48725171 ~ 48725414 (+)
G1182153 NA other upstream 433439 48119613 ~ 48122575 (+)
G1181955 NA other upstream 812950 47742361 ~ 47743064 (+)
G1181636 NA other upstream 1006466 47549279 ~ 47549548 (+)
tmem100a LOC106606948 other upstream 1086002 47468012 ~ 47471205 (+)
G1181472 NA other upstream 1181537 47374163 ~ 47374477 (+)
G1182541 NA other downstream 385125 48946749 ~ 48947969 (+)
G1182555 NA other downstream 416376 48978000 ~ 48981403 (+)
G1182595 NA other downstream 502161 49063785 ~ 49065142 (+)
G1182629 NA other downstream 553351 49114975 ~ 49118697 (+)
LOC110486671 LOC100335037 other downstream 639362 49198846 ~ 49202693 (+)

Expression


Co-expression Network