Gene
RNA
| Item | Value |
|---|---|
| gene id | G1182359 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 48563817 ~ 48564807 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1348354 | True | 865 | lncRNA | 0.44 | 2 | 48563817 | 48564807 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486644 | LOC106601551 | coding | upstream | 23330 | 48532510 ~ 48540487 (+) |
| ifi35 | LOC106606925 | coding | upstream | 57609 | 48500511 ~ 48506208 (+) |
| LOC110486640 | LOC106601555 | coding | upstream | 65142 | 48496613 ~ 48498675 (+) |
| LOC110486639 | rund1 | coding | upstream | 70298 | 48488445 ~ 48493519 (+) |
| LOC110486632 | LOC106601556 | coding | upstream | 77432 | 48475804 ~ 48486385 (+) |
| LOC110486647 | LOC106601548 | coding | downstream | 34171 | 48598978 ~ 48622758 (+) |
| LOC110486650 | akts1 | coding | downstream | 133396 | 48698203 ~ 48704379 (+) |
| LOC110486653 | LOC106601538 | coding | downstream | 183208 | 48748015 ~ 48796028 (+) |
| LOC110486658 | NA | coding | downstream | 392970 | 48957777 ~ 48959202 (+) |
| LOC118938637 | NA | coding | downstream | 393382 | 48958189 ~ 48958276 (+) |
| G1182350 | NA | non-coding | upstream | 26757 | 48536827 ~ 48537060 (+) |
| G1182344 | NA | non-coding | upstream | 34384 | 48528914 ~ 48529433 (+) |
| G1182342 | NA | non-coding | upstream | 43368 | 48516581 ~ 48520449 (+) |
| G1182341 | NA | non-coding | upstream | 47534 | 48516084 ~ 48516283 (+) |
| G1182416 | NA | non-coding | downstream | 97318 | 48662125 ~ 48662517 (+) |
| G1182422 | NA | non-coding | downstream | 100410 | 48665217 ~ 48665595 (+) |
| G1182449 | NA | non-coding | downstream | 160364 | 48725171 ~ 48725414 (+) |
| G1182460 | NA | non-coding | downstream | 175021 | 48739828 ~ 48740040 (+) |
| G1182354 | LOC106601550 | other | upstream | 2193 | 48556014 ~ 48561624 (+) |
| G1182153 | NA | other | upstream | 441242 | 48119613 ~ 48122575 (+) |
| G1181955 | NA | other | upstream | 820753 | 47742361 ~ 47743064 (+) |
| G1181636 | NA | other | upstream | 1014269 | 47549279 ~ 47549548 (+) |
| tmem100a | LOC106606948 | other | upstream | 1093805 | 47468012 ~ 47471205 (+) |
| G1182541 | NA | other | downstream | 381942 | 48946749 ~ 48947969 (+) |
| G1182555 | NA | other | downstream | 413193 | 48978000 ~ 48981403 (+) |
| G1182595 | NA | other | downstream | 498978 | 49063785 ~ 49065142 (+) |
| G1182629 | NA | other | downstream | 550168 | 49114975 ~ 49118697 (+) |
| LOC110486671 | LOC100335037 | other | downstream | 636179 | 49198846 ~ 49202693 (+) |
