Gene
RNA
| Item | Value |
|---|---|
| gene id | G1183354 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 48725992 ~ 48726228 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1349520 | True | 237 | lncRNA | 0.38 | 1 | 48725992 | 48726228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486651 | LOC106601513 | coding | downstream | 1216 | 48705713 ~ 48724776 (-) |
| LOC110486649 | LOC106606880 | coding | downstream | 28014 | 48689028 ~ 48697978 (-) |
| LOC110487552 | LOC106601568 | coding | downstream | 39868 | 48683982 ~ 48686124 (-) |
| LOC110486648 | nucb1 | coding | downstream | 42515 | 48670231 ~ 48683477 (-) |
| LOC110485203 | ppfia3 | coding | downstream | 60403 | 48623806 ~ 48665589 (-) |
| LOC110486652 | LOC106606918 | coding | upstream | 4911 | 48731139 ~ 48739071 (-) |
| LOC110486654 | LOC106606919 | coding | upstream | 98240 | 48824468 ~ 48831876 (-) |
| LOC110486655 | LOC106601541 | coding | upstream | 132020 | 48858248 ~ 48872847 (-) |
| LOC110486656 | syt3 | coding | upstream | 149443 | 48875671 ~ 48936482 (-) |
| LOC110486657 | LOC106595301 | coding | upstream | 220500 | 48946728 ~ 48956570 (-) |
| G1183353 | NA | non-coding | downstream | 115 | 48725602 ~ 48725877 (-) |
| G1183330 | NA | non-coding | downstream | 69240 | 48656351 ~ 48656752 (-) |
| G1183319 | NA | non-coding | downstream | 103236 | 48622211 ~ 48622756 (-) |
| G1183318 | LOC106601548 | non-coding | downstream | 104388 | 48619001 ~ 48621604 (-) |
| G1183224 | NA | non-coding | downstream | 206285 | 48516721 ~ 48519707 (-) |
| G1183357 | NA | non-coding | upstream | 3479 | 48729707 ~ 48730020 (-) |
| G1183361 | NA | non-coding | upstream | 14089 | 48740317 ~ 48740531 (-) |
| G1183362 | NA | non-coding | upstream | 15010 | 48741238 ~ 48741469 (-) |
| G1183363 | NA | non-coding | upstream | 15585 | 48741813 ~ 48742092 (-) |
| G1183379 | NA | non-coding | upstream | 37781 | 48764009 ~ 48772871 (-) |
| G1183337 | NA | other | downstream | 57910 | 48667788 ~ 48668082 (-) |
| G1183225 | NA | other | downstream | 255009 | 48435826 ~ 48470983 (-) |
| G1183196 | NA | other | downstream | 336274 | 48379267 ~ 48389718 (-) |
| G1183192 | NA | other | downstream | 349026 | 48364056 ~ 48376966 (-) |
| G1183190 | NA | other | downstream | 360892 | 48361598 ~ 48365100 (-) |
| LOC110485205 | LOC106597701 | other | upstream | 246955 | 48959315 ~ 49053966 (-) |
| setd1a | LOC106585476 | other | upstream | 630150 | 49346540 ~ 49361234 (-) |
| LOC110486687 | LOC106601611 | other | upstream | 760698 | 49486817 ~ 49504819 (-) |
| LOC118938314 | NA | other | upstream | 810971 | 49537199 ~ 49544276 (-) |
