G1183375


Basic Information

Item Value
gene id G1183375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 48790151 ~ 48796017 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1349543
ACTGTTTTATGTGTGTTGCACTGACAGGTTCATGTCACAGATAAGAAGAATCCATCTCTGAGCTGTAATATTCAGCCATTATTAAGGTACTCTATTACTACTCTCAATTAGCTTGTCTCAATGTAGTGGTCTGTTATTATCATAATTCATTCAGTTATTACCGATATGGTATTTGACATGCCACTGGTGAGGAtgtgagaacgagagagatagagagaggaagaaagagagagagagggagaaagagagaaagagggagatagagagagcataTTTAGAAAACATCACCAGTTTTTTTTATTCTAATCATATTTATTCACGTCTATCCTGTTATACATAATCCACTATGATTCCTGCAGAACTGTATCCTCTGGTGTTTCTATCGGTCACTGTCGCTCATTtcttctcctcgtctccttctttCTTCTCCTTTAAGACTCGGACTTCCAGCCTGCACTCCACCTCGTCCTCCCCCAGGTCGTTGATGGCCTTACAGGAGTACTTGCCCCCGTCAAACTGTCCAGGCTTCCTGATGTTCAGGGTCAACACCCCCTGGTTGTTCTGCATCAAGAATTTAGGATCCTCCCCAATGATCATCTTGTTTTTCATCCACACTATCTTAGCctgagGGTAGGCCCGGACAGCACAGCTGATGGCAGTACTGTAGCCTGCAACAACAACCCTGTCCACTAGGGGAGCTGTAAACTTGGGGGAGCTGCTCATGTCCTTCTCTTTGAAGGCTGGTTTGTTGTACTCCAGATCTGAGGGAGGGATATA

Function

NR:

description
myosin-binding protein C, fast-type, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1349543 True 777 lncRNA 0.44 4 48790151 48796017

Neighbor

gene id symbol gene type direction distance location
LOC110486652 LOC106606918 coding downstream 51080 48731139 ~ 48739071 (-)
LOC110486651 LOC106601513 coding downstream 65375 48705713 ~ 48724776 (-)
LOC110486649 LOC106606880 coding downstream 92173 48689028 ~ 48697978 (-)
LOC110487552 LOC106601568 coding downstream 104027 48683982 ~ 48686124 (-)
LOC110486648 nucb1 coding downstream 106674 48670231 ~ 48683477 (-)
LOC110486654 LOC106606919 coding upstream 28451 48824468 ~ 48831876 (-)
LOC110486655 LOC106601541 coding upstream 62231 48858248 ~ 48872847 (-)
LOC110486656 syt3 coding upstream 79654 48875671 ~ 48936482 (-)
LOC110486657 LOC106595301 coding upstream 150711 48946728 ~ 48956570 (-)
LOC110485205 LOC106597701 coding upstream 164888 48959315 ~ 49053966 (-)
G1183379 NA non-coding downstream 17280 48764009 ~ 48772871 (-)
G1183363 NA non-coding downstream 48059 48741813 ~ 48742092 (-)
G1183362 NA non-coding downstream 48682 48741238 ~ 48741469 (-)
G1183361 NA non-coding downstream 49620 48740317 ~ 48740531 (-)
G1183357 NA non-coding downstream 60131 48729707 ~ 48730020 (-)
G1183396 NA non-coding upstream 10921 48806938 ~ 48807148 (-)
G1183424 NA non-coding upstream 87972 48883989 ~ 48934491 (-)
G1183432 NA non-coding upstream 108211 48904228 ~ 48905481 (-)
G1183436 NA non-coding upstream 144355 48940372 ~ 48940591 (-)
G1183337 NA other downstream 122069 48667788 ~ 48668082 (-)
G1183225 NA other downstream 319168 48435826 ~ 48470983 (-)
G1183196 NA other downstream 400433 48379267 ~ 48389718 (-)
G1183192 NA other downstream 413185 48364056 ~ 48376966 (-)
G1183190 NA other downstream 425051 48361598 ~ 48365100 (-)
setd1a LOC106585476 other upstream 560361 49346540 ~ 49361234 (-)
LOC110486687 LOC106601611 other upstream 690909 49486817 ~ 49504819 (-)
LOC118938314 NA other upstream 741182 49537199 ~ 49544276 (-)

Expression


Co-expression Network