Gene
RNA
| Item | Value |
|---|---|
| gene id | G1183396 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 48806938 ~ 48807148 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1349571 | True | 211 | lncRNA | 0.36 | 1 | 48806938 | 48807148 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486652 | LOC106606918 | coding | downstream | 67867 | 48731139 ~ 48739071 (-) |
| LOC110486651 | LOC106601513 | coding | downstream | 82162 | 48705713 ~ 48724776 (-) |
| LOC110486649 | LOC106606880 | coding | downstream | 108960 | 48689028 ~ 48697978 (-) |
| LOC110487552 | LOC106601568 | coding | downstream | 120814 | 48683982 ~ 48686124 (-) |
| LOC110486648 | nucb1 | coding | downstream | 123461 | 48670231 ~ 48683477 (-) |
| LOC110486654 | LOC106606919 | coding | upstream | 17320 | 48824468 ~ 48831876 (-) |
| LOC110486655 | LOC106601541 | coding | upstream | 51100 | 48858248 ~ 48872847 (-) |
| LOC110486656 | syt3 | coding | upstream | 68523 | 48875671 ~ 48936482 (-) |
| LOC110486657 | LOC106595301 | coding | upstream | 139580 | 48946728 ~ 48956570 (-) |
| LOC110485205 | LOC106597701 | coding | upstream | 153757 | 48959315 ~ 49053966 (-) |
| G1183375 | NA | non-coding | downstream | 10921 | 48790151 ~ 48796017 (-) |
| G1183379 | NA | non-coding | downstream | 34067 | 48764009 ~ 48772871 (-) |
| G1183363 | NA | non-coding | downstream | 64846 | 48741813 ~ 48742092 (-) |
| G1183362 | NA | non-coding | downstream | 65469 | 48741238 ~ 48741469 (-) |
| G1183361 | NA | non-coding | downstream | 66407 | 48740317 ~ 48740531 (-) |
| G1183424 | NA | non-coding | upstream | 76841 | 48883989 ~ 48934491 (-) |
| G1183432 | NA | non-coding | upstream | 97080 | 48904228 ~ 48905481 (-) |
| G1183436 | NA | non-coding | upstream | 133224 | 48940372 ~ 48940591 (-) |
| G1183444 | NA | non-coding | upstream | 170385 | 48977533 ~ 48977865 (-) |
| G1183337 | NA | other | downstream | 138856 | 48667788 ~ 48668082 (-) |
| G1183225 | NA | other | downstream | 335955 | 48435826 ~ 48470983 (-) |
| G1183196 | NA | other | downstream | 417220 | 48379267 ~ 48389718 (-) |
| G1183192 | NA | other | downstream | 429972 | 48364056 ~ 48376966 (-) |
| G1183190 | NA | other | downstream | 441838 | 48361598 ~ 48365100 (-) |
| setd1a | LOC106585476 | other | upstream | 549230 | 49346540 ~ 49361234 (-) |
| LOC110486687 | LOC106601611 | other | upstream | 679778 | 49486817 ~ 49504819 (-) |
| LOC118938314 | NA | other | upstream | 730051 | 49537199 ~ 49544276 (-) |
