Gene
RNA
| Item | Value |
|---|---|
| gene id | G1182493 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 48810460 ~ 48865525 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1348525 | True | 205 | lncRNA | 0.39 | 2 | 48810460 | 48865525 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486653 | LOC106601538 | coding | upstream | 14432 | 48748015 ~ 48796028 (+) |
| LOC110486650 | akts1 | coding | upstream | 106081 | 48698203 ~ 48704379 (+) |
| LOC110486647 | LOC106601548 | coding | upstream | 188270 | 48598978 ~ 48622758 (+) |
| LOC110486644 | LOC106601551 | coding | upstream | 269973 | 48532510 ~ 48540487 (+) |
| ifi35 | LOC106606925 | coding | upstream | 304252 | 48500511 ~ 48506208 (+) |
| LOC110486658 | NA | coding | downstream | 92252 | 48957777 ~ 48959202 (+) |
| LOC118938637 | NA | coding | downstream | 92664 | 48958189 ~ 48958276 (+) |
| LOC118938636 | NA | coding | downstream | 92897 | 48958422 ~ 48958510 (+) |
| LOC118938635 | NA | coding | downstream | 93153 | 48958678 ~ 48958765 (+) |
| LOC110486662 | LOC106606881 | coding | downstream | 234482 | 49100007 ~ 49104036 (+) |
| G1182463 | NA | non-coding | upstream | 47202 | 48743207 ~ 48763258 (+) |
| G1182460 | NA | non-coding | upstream | 70420 | 48739828 ~ 48740040 (+) |
| G1182449 | NA | non-coding | upstream | 85046 | 48725171 ~ 48725414 (+) |
| G1182422 | NA | non-coding | upstream | 144865 | 48665217 ~ 48665595 (+) |
| G1182416 | NA | non-coding | upstream | 147943 | 48662125 ~ 48662517 (+) |
| G1182521 | NA | non-coding | downstream | 9545 | 48875070 ~ 48875345 (+) |
| G1182492 | NA | non-coding | downstream | 10149 | 48875674 ~ 48879245 (+) |
| G1182540 | NA | non-coding | downstream | 78882 | 48944407 ~ 48944967 (+) |
| G1182542 | LOC106595301 | non-coding | downstream | 84363 | 48949888 ~ 48956559 (+) |
| G1182547 | NA | non-coding | downstream | 92270 | 48957795 ~ 48959202 (+) |
| G1182354 | LOC106601550 | other | upstream | 248836 | 48556014 ~ 48561624 (+) |
| G1182153 | NA | other | upstream | 687885 | 48119613 ~ 48122575 (+) |
| G1181955 | NA | other | upstream | 1067396 | 47742361 ~ 47743064 (+) |
| G1181636 | NA | other | upstream | 1260912 | 47549279 ~ 47549548 (+) |
| tmem100a | LOC106606948 | other | upstream | 1340448 | 47468012 ~ 47471205 (+) |
| G1182541 | NA | other | downstream | 81224 | 48946749 ~ 48947969 (+) |
| G1182555 | NA | other | downstream | 112475 | 48978000 ~ 48981403 (+) |
| G1182595 | NA | other | downstream | 198260 | 49063785 ~ 49065142 (+) |
| G1182629 | NA | other | downstream | 249450 | 49114975 ~ 49118697 (+) |
| LOC110486671 | LOC100335037 | other | downstream | 335461 | 49198846 ~ 49202693 (+) |
